MotifHOMEZ.H12INVITRO.0.S.B
Gene (human)HOMEZ
(GeneCards)
Gene synonyms (human)KIAA1443
Gene (mouse)Homez
Gene synonyms (mouse)Kiaa1443
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length12
ConsensusdhvATCGTTTdn
GC content30.07%
Information content (bits; total / per base)13.3 / 1.108
Data sourcesHT-SELEX
Aligned words6103

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Non-Methyl HT-SELEX, 2 experiments median 0.929 0.906 0.851 0.822 0.752 0.736
best 0.964 0.952 0.892 0.87 0.788 0.775
TF superclassHelix-turn-helix domains {3} (TFClass)
TF classHomeo domain factors {3.1} (TFClass)
TF familyHD-ZF {3.1.8} (TFClass)
TF subfamilyZHX {3.1.8.5} (TFClass)
TFClass IDTFClass: 3.1.8.5.4
HGNCHGNC:20164
MGIMGI:2678023
EntrezGene (human)GeneID:57594
(SSTAR profile)
EntrezGene (mouse)GeneID:239099
(SSTAR profile)
UniProt ID (human)HOMEZ_HUMAN
UniProt ID (mouse)HOMEZ_MOUSE
UniProt AC (human)Q8IX15
(TFClass)
UniProt AC (mouse)Q80W88
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 0 mouse
HT-SELEX 2
Methyl-HT-SELEX 0
PCM
ACGT
013213.75654.75782.751451.75
023287.25605.25497.251713.25
033474.01382.0642.0605.0
045664.0396.00.043.0
050.00.00.06103.0
060.06103.00.00.0
070.00.06103.00.0
0831.00.0152.05920.0
09570.05.08.05520.0
10998.0126.0172.04807.0
111146.0894.0911.03152.0
121209.751343.751242.752306.75
PFM
ACGT
010.5270.1070.1280.238
020.5390.0990.0810.281
030.5690.2260.1050.099
040.9280.0650.00.007
050.00.00.01.0
060.01.00.00.0
070.00.01.00.0
080.0050.00.0250.97
090.0930.0010.0010.904
100.1640.0210.0280.788
110.1880.1460.1490.516
120.1980.220.2040.378
PWM
ACGT
010.744-0.844-0.666-0.05
020.767-0.922-1.1180.116
030.822-0.099-0.864-0.923
041.311-1.345-6.553-3.521
05-6.553-6.553-6.5531.385
06-6.5531.385-6.553-6.553
07-6.553-6.5531.385-6.553
08-3.83-6.553-2.2941.355
09-0.982-5.36-5.0111.285
10-0.424-2.478-2.1721.147
11-0.286-0.534-0.5150.725
12-0.232-0.127-0.2050.413
Standard thresholds
P-value Threshold
0.001 2.686315
0.0005 4.28107
0.0001 7.208125