MotifHINFP.H12INVIVO.0.P.B
Gene (human)HINFP
(GeneCards)
Gene synonyms (human)MIZF, ZNF743
Gene (mouse)Hinfp
Gene synonyms (mouse)Mizf
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length20
ConsensusvCGGACYbvRddGRRRMChS
GC content65.61%
Information content (bits; total / per base)16.857 / 0.843
Data sourcesChIP-Seq
Aligned words123

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 4 (25) 0.731 0.852 0.693 0.823 0.698 0.863 3.488 5.674 44.432 246.051

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Non-Methyl HT-SELEX, 2 experiments median 0.52 0.534 0.508 0.515 0.504 0.508
best 0.539 0.557 0.515 0.526 0.507 0.514
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMultiple dispersed zinc fingers {2.3.4} (TFClass)
TF subfamilyHINFP-like {2.3.4.21} (TFClass)
TFClass IDTFClass: 2.3.4.21.1
HGNCHGNC:17850
MGIMGI:2429620
EntrezGene (human)GeneID:25988
(SSTAR profile)
EntrezGene (mouse)GeneID:102423
(SSTAR profile)
UniProt ID (human)HINFP_HUMAN
UniProt ID (mouse)HINFP_MOUSE
UniProt AC (human)Q9BQA5
(TFClass)
UniProt AC (mouse)Q8K1K9
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 4 human, 0 mouse
HT-SELEX 2
Methyl-HT-SELEX 0
PCM
ACGT
0124.032.061.06.0
0214.099.06.04.0
032.06.0114.01.0
043.03.0117.00.0
05116.03.04.00.0
064.0111.08.00.0
074.094.012.013.0
0816.048.035.024.0
0942.021.049.011.0
1047.04.062.010.0
1116.09.082.016.0
1245.011.016.051.0
130.00.0123.00.0
1473.04.042.04.0
1540.09.072.02.0
1651.08.063.01.0
1771.026.024.02.0
1816.0103.03.01.0
1954.017.09.043.0
208.016.088.011.0
PFM
ACGT
010.1950.260.4960.049
020.1140.8050.0490.033
030.0160.0490.9270.008
040.0240.0240.9510.0
050.9430.0240.0330.0
060.0330.9020.0650.0
070.0330.7640.0980.106
080.130.390.2850.195
090.3410.1710.3980.089
100.3820.0330.5040.081
110.130.0730.6670.13
120.3660.0890.130.415
130.00.01.00.0
140.5930.0330.3410.033
150.3250.0730.5850.016
160.4150.0650.5120.008
170.5770.2110.1950.016
180.130.8370.0240.008
190.4390.1380.0730.35
200.0650.130.7150.089
PWM
ACGT
01-0.2370.0380.666-1.49
02-0.7431.143-1.49-1.815
03-2.3-1.491.282-2.674
04-2.028-2.0281.308-3.279
051.3-2.028-1.815-3.279
06-1.8151.256-1.245-3.279
07-1.8151.092-0.884-0.811
08-0.6190.4320.125-0.237
090.302-0.3640.452-0.963
100.411-1.8150.682-1.048
11-0.619-1.1420.957-0.619
120.369-0.963-0.6190.491
13-3.279-3.2791.358-3.279
140.843-1.8150.302-1.815
150.254-1.1420.829-2.3
160.491-1.2450.698-2.674
170.815-0.161-0.237-2.3
18-0.6191.182-2.028-2.674
190.547-0.563-1.1420.325
20-1.245-0.6191.027-0.963
Standard thresholds
P-value Threshold
0.001 3.05881
0.0005 4.15581
0.0001 6.47176