| Motif | HINFP.H12INVITRO.1.P.B |
| Gene (human) | HINFP (GeneCards) |
| Gene synonyms (human) | MIZF, ZNF743 |
| Gene (mouse) | Hinfp |
| Gene synonyms (mouse) | Mizf |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 1 |
| Quality | B |
| Motif | HINFP.H12INVITRO.1.P.B |
| Gene (human) | HINFP (GeneCards) |
| Gene synonyms (human) | MIZF, ZNF743 |
| Gene (mouse) | Hinfp |
| Gene synonyms (mouse) | Mizf |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 1 |
| Quality | B |
| Motif length | 8 |
| Consensus | vSMGGAhY |
| GC content | 68.9% |
| Information content (bits; total / per base) | 7.39 / 0.924 |
| Data sources | ChIP-Seq |
| Aligned words | 123 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 4 (25) | 0.685 | 0.762 | 0.568 | 0.624 | 0.569 | 0.703 | 1.291 | 1.86 | 19.252 | 123.328 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Non-Methyl HT-SELEX, 2 experiments | median | 0.578 | 0.591 | 0.508 | 0.536 | 0.488 | 0.513 |
| best | 0.63 | 0.64 | 0.53 | 0.56 | 0.497 | 0.527 | |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | Multiple dispersed zinc fingers {2.3.4} (TFClass) |
| TF subfamily | HINFP-like {2.3.4.21} (TFClass) |
| TFClass ID | TFClass: 2.3.4.21.1 |
| HGNC | HGNC:17850 |
| MGI | MGI:2429620 |
| EntrezGene (human) | GeneID:25988 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:102423 (SSTAR profile) |
| UniProt ID (human) | HINFP_HUMAN |
| UniProt ID (mouse) | HINFP_MOUSE |
| UniProt AC (human) | Q9BQA5 (TFClass) |
| UniProt AC (mouse) | Q8K1K9 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 4 human, 0 mouse |
| HT-SELEX | 2 |
| Methyl-HT-SELEX | 0 |
| PCM | HINFP.H12INVITRO.1.P.B.pcm |
| PWM | HINFP.H12INVITRO.1.P.B.pwm |
| PFM | HINFP.H12INVITRO.1.P.B.pfm |
| Alignment | HINFP.H12INVITRO.1.P.B.words.tsv |
| Threshold to P-value map | HINFP.H12INVITRO.1.P.B.thr |
| Motif in other formats | |
| JASPAR format | HINFP.H12INVITRO.1.P.B_jaspar_format.txt |
| MEME format | HINFP.H12INVITRO.1.P.B_meme_format.meme |
| Transfac format | HINFP.H12INVITRO.1.P.B_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 42.0 | 21.0 | 51.0 | 9.0 |
| 02 | 18.0 | 49.0 | 54.0 | 2.0 |
| 03 | 28.0 | 85.0 | 0.0 | 10.0 |
| 04 | 9.0 | 0.0 | 112.0 | 2.0 |
| 05 | 1.0 | 0.0 | 122.0 | 0.0 |
| 06 | 113.0 | 10.0 | 0.0 | 0.0 |
| 07 | 24.0 | 70.0 | 12.0 | 17.0 |
| 08 | 7.0 | 75.0 | 17.0 | 24.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.341 | 0.171 | 0.415 | 0.073 |
| 02 | 0.146 | 0.398 | 0.439 | 0.016 |
| 03 | 0.228 | 0.691 | 0.0 | 0.081 |
| 04 | 0.073 | 0.0 | 0.911 | 0.016 |
| 05 | 0.008 | 0.0 | 0.992 | 0.0 |
| 06 | 0.919 | 0.081 | 0.0 | 0.0 |
| 07 | 0.195 | 0.569 | 0.098 | 0.138 |
| 08 | 0.057 | 0.61 | 0.138 | 0.195 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.302 | -0.364 | 0.491 | -1.142 |
| 02 | -0.509 | 0.452 | 0.547 | -2.3 |
| 03 | -0.09 | 0.992 | -3.279 | -1.048 |
| 04 | -1.142 | -3.279 | 1.265 | -2.3 |
| 05 | -2.674 | -3.279 | 1.35 | -3.279 |
| 06 | 1.274 | -1.048 | -3.279 | -3.279 |
| 07 | -0.237 | 0.801 | -0.884 | -0.563 |
| 08 | -1.36 | 0.869 | -0.563 | -0.237 |
| P-value | Threshold |
|---|---|
| 0.001 | 5.21075 |
| 0.0005 | 5.710875 |
| 0.0001 | 6.547155 |