MotifHINFP.H12INVITRO.1.P.B
Gene (human)HINFP
(GeneCards)
Gene synonyms (human)MIZF, ZNF743
Gene (mouse)Hinfp
Gene synonyms (mouse)Mizf
LOGO
LOGO (reverse complement)
Motif subtype1
Quality
B
Motif length8
ConsensusvSMGGAhY
GC content68.9%
Information content (bits; total / per base)7.39 / 0.924
Data sourcesChIP-Seq
Aligned words123

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 4 (25) 0.685 0.762 0.568 0.624 0.569 0.703 1.291 1.86 19.252 123.328

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Non-Methyl HT-SELEX, 2 experiments median 0.578 0.591 0.508 0.536 0.488 0.513
best 0.63 0.64 0.53 0.56 0.497 0.527
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMultiple dispersed zinc fingers {2.3.4} (TFClass)
TF subfamilyHINFP-like {2.3.4.21} (TFClass)
TFClass IDTFClass: 2.3.4.21.1
HGNCHGNC:17850
MGIMGI:2429620
EntrezGene (human)GeneID:25988
(SSTAR profile)
EntrezGene (mouse)GeneID:102423
(SSTAR profile)
UniProt ID (human)HINFP_HUMAN
UniProt ID (mouse)HINFP_MOUSE
UniProt AC (human)Q9BQA5
(TFClass)
UniProt AC (mouse)Q8K1K9
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 4 human, 0 mouse
HT-SELEX 2
Methyl-HT-SELEX 0
PCM
ACGT
0142.021.051.09.0
0218.049.054.02.0
0328.085.00.010.0
049.00.0112.02.0
051.00.0122.00.0
06113.010.00.00.0
0724.070.012.017.0
087.075.017.024.0
PFM
ACGT
010.3410.1710.4150.073
020.1460.3980.4390.016
030.2280.6910.00.081
040.0730.00.9110.016
050.0080.00.9920.0
060.9190.0810.00.0
070.1950.5690.0980.138
080.0570.610.1380.195
PWM
ACGT
010.302-0.3640.491-1.142
02-0.5090.4520.547-2.3
03-0.090.992-3.279-1.048
04-1.142-3.2791.265-2.3
05-2.674-3.2791.35-3.279
061.274-1.048-3.279-3.279
07-0.2370.801-0.884-0.563
08-1.360.869-0.563-0.237
Standard thresholds
P-value Threshold
0.001 5.21075
0.0005 5.710875
0.0001 6.547155