MotifHIC2.H12INVIVO.0.P.B
Gene (human)HIC2
(GeneCards)
Gene synonyms (human)HRG22, KIAA1020, ZBTB30
Gene (mouse)Hic2
Gene synonyms (mouse)Kiaa1020
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length8
ConsensusvMTKCCWv
GC content58.63%
Information content (bits; total / per base)7.216 / 0.902
Data sourcesChIP-Seq
Aligned words471

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Mouse 2 (10) 0.735 0.749 0.591 0.595 0.632 0.643 1.361 1.38 27.398 32.509
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMultiple dispersed zinc fingers {2.3.4} (TFClass)
TF subfamilyHIC {2.3.4.17} (TFClass)
TFClass IDTFClass: 2.3.4.17.2
HGNCHGNC:18595
MGIMGI:1929869
EntrezGene (human)GeneID:23119
(SSTAR profile)
EntrezGene (mouse)GeneID:58180
(SSTAR profile)
UniProt ID (human)HIC2_HUMAN
UniProt ID (mouse)HIC2_MOUSE
UniProt AC (human)Q96JB3
(TFClass)
UniProt AC (mouse)Q9JLZ6
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 2 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0196.0212.0130.033.0
02228.0182.033.028.0
0329.015.023.0404.0
049.012.0274.0176.0
057.0459.00.05.0
063.0462.00.06.0
07216.060.01.0194.0
0885.078.0268.040.0
PFM
ACGT
010.2040.450.2760.07
020.4840.3860.070.059
030.0620.0320.0490.858
040.0190.0250.5820.374
050.0150.9750.00.011
060.0060.9810.00.013
070.4590.1270.0020.412
080.180.1660.5690.085
PWM
ACGT
01-0.2010.5820.098-1.239
020.6550.431-1.239-1.396
03-1.363-1.976-1.5811.224
04-2.426-2.1760.8370.398
05-2.6371.351-4.351-2.904
06-3.2691.357-4.351-2.761
070.601-0.662-3.850.494
08-0.321-0.4050.815-1.055
Standard thresholds
P-value Threshold
0.001 5.367645
0.0005 5.873495
0.0001 6.85893