| Motif | HIC2.H12INVITRO.0.P.D |
| Gene (human) | HIC2 (GeneCards) |
| Gene synonyms (human) | HRG22, KIAA1020, ZBTB30 |
| Gene (mouse) | Hic2 |
| Gene synonyms (mouse) | Kiaa1020 |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | HIC2.H12INVITRO.0.P.D |
| Gene (human) | HIC2 (GeneCards) |
| Gene synonyms (human) | HRG22, KIAA1020, ZBTB30 |
| Gene (mouse) | Hic2 |
| Gene synonyms (mouse) | Kiaa1020 |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 8 |
| Consensus | vMTKCCWv |
| GC content | 58.63% |
| Information content (bits; total / per base) | 7.216 / 0.902 |
| Data sources | ChIP-Seq |
| Aligned words | 471 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Mouse | 2 (10) | 0.735 | 0.749 | 0.591 | 0.595 | 0.632 | 0.643 | 1.361 | 1.38 | 27.398 | 32.509 |
| TF superclass | Zinc-coordinating DNA-binding domains {2} (TFClass) |
| TF class | C2H2 zinc finger factors {2.3} (TFClass) |
| TF family | Multiple dispersed zinc fingers {2.3.4} (TFClass) |
| TF subfamily | HIC {2.3.4.17} (TFClass) |
| TFClass ID | TFClass: 2.3.4.17.2 |
| HGNC | HGNC:18595 |
| MGI | MGI:1929869 |
| EntrezGene (human) | GeneID:23119 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:58180 (SSTAR profile) |
| UniProt ID (human) | HIC2_HUMAN |
| UniProt ID (mouse) | HIC2_MOUSE |
| UniProt AC (human) | Q96JB3 (TFClass) |
| UniProt AC (mouse) | Q9JLZ6 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 0 human, 2 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | HIC2.H12INVITRO.0.P.D.pcm |
| PWM | HIC2.H12INVITRO.0.P.D.pwm |
| PFM | HIC2.H12INVITRO.0.P.D.pfm |
| Alignment | HIC2.H12INVITRO.0.P.D.words.tsv |
| Threshold to P-value map | HIC2.H12INVITRO.0.P.D.thr |
| Motif in other formats | |
| JASPAR format | HIC2.H12INVITRO.0.P.D_jaspar_format.txt |
| MEME format | HIC2.H12INVITRO.0.P.D_meme_format.meme |
| Transfac format | HIC2.H12INVITRO.0.P.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 96.0 | 212.0 | 130.0 | 33.0 |
| 02 | 228.0 | 182.0 | 33.0 | 28.0 |
| 03 | 29.0 | 15.0 | 23.0 | 404.0 |
| 04 | 9.0 | 12.0 | 274.0 | 176.0 |
| 05 | 7.0 | 459.0 | 0.0 | 5.0 |
| 06 | 3.0 | 462.0 | 0.0 | 6.0 |
| 07 | 216.0 | 60.0 | 1.0 | 194.0 |
| 08 | 85.0 | 78.0 | 268.0 | 40.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.204 | 0.45 | 0.276 | 0.07 |
| 02 | 0.484 | 0.386 | 0.07 | 0.059 |
| 03 | 0.062 | 0.032 | 0.049 | 0.858 |
| 04 | 0.019 | 0.025 | 0.582 | 0.374 |
| 05 | 0.015 | 0.975 | 0.0 | 0.011 |
| 06 | 0.006 | 0.981 | 0.0 | 0.013 |
| 07 | 0.459 | 0.127 | 0.002 | 0.412 |
| 08 | 0.18 | 0.166 | 0.569 | 0.085 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.201 | 0.582 | 0.098 | -1.239 |
| 02 | 0.655 | 0.431 | -1.239 | -1.396 |
| 03 | -1.363 | -1.976 | -1.581 | 1.224 |
| 04 | -2.426 | -2.176 | 0.837 | 0.398 |
| 05 | -2.637 | 1.351 | -4.351 | -2.904 |
| 06 | -3.269 | 1.357 | -4.351 | -2.761 |
| 07 | 0.601 | -0.662 | -3.85 | 0.494 |
| 08 | -0.321 | -0.405 | 0.815 | -1.055 |
| P-value | Threshold |
|---|---|
| 0.001 | 5.367645 |
| 0.0005 | 5.873495 |
| 0.0001 | 6.85893 |