MotifHEY2.H12INVIVO.0.S.D
Gene (human)HEY2
(GeneCards)
Gene synonyms (human)BHLHB32, CHF1, GRL, HERP, HERP1, HRT2
Gene (mouse)Hey2
Gene synonyms (mouse)Chf1, Herp, Herp1, Hesr2, Hrt2
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length13
ConsensusnKGCACGTGYYnn
GC content63.41%
Information content (bits; total / per base)15.703 / 1.208
Data sourcesHT-SELEX
Aligned words1695

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Non-Methyl HT-SELEX, 5 experiments median 0.886 0.86 0.779 0.754 0.682 0.673
best 0.994 0.99 0.988 0.982 0.915 0.909

rSNP benchmarking, SNP-SELEX auROC auPRC Pearson r Kendall tau
batch 2 0.811 0.686 0.823 0.622
TF superclassBasic domains {1} (TFClass)
TF classBasic helix-loop-helix factors (bHLH) {1.2} (TFClass)
TF familyHairy-related {1.2.4} (TFClass)
TF subfamilyHAIRY {1.2.4.1} (TFClass)
TFClass IDTFClass: 1.2.4.1.9
HGNCHGNC:4881
MGIMGI:1341884
EntrezGene (human)GeneID:23493
(SSTAR profile)
EntrezGene (mouse)GeneID:15214
(SSTAR profile)
UniProt ID (human)HEY2_HUMAN
UniProt ID (mouse)HEY2_MOUSE
UniProt AC (human)Q9UBP5
(TFClass)
UniProt AC (mouse)Q9QUS4
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 0 mouse
HT-SELEX 5
Methyl-HT-SELEX 0
PCM
ACGT
01435.75347.75538.75372.75
02110.5192.51125.5266.5
0347.086.01534.028.0
040.01695.00.00.0
051695.00.00.00.0
060.01695.00.00.0
070.00.01695.00.0
080.00.00.01695.0
090.00.01695.00.0
100.0347.0200.01148.0
1172.01237.056.0330.0
12490.75372.75268.75562.75
13372.25465.25421.25436.25
PFM
ACGT
010.2570.2050.3180.22
020.0650.1140.6640.157
030.0280.0510.9050.017
040.01.00.00.0
051.00.00.00.0
060.01.00.00.0
070.00.01.00.0
080.00.00.01.0
090.00.01.00.0
100.00.2050.1180.677
110.0420.730.0330.195
120.290.220.1590.332
130.220.2740.2490.257
PWM
ACGT
010.028-0.1970.239-0.128
02-1.332-0.7840.974-0.461
03-2.165-1.5781.283-2.657
04-5.4341.383-5.434-5.434
051.383-5.434-5.434-5.434
06-5.4341.383-5.434-5.434
07-5.434-5.4341.383-5.434
08-5.434-5.434-5.4341.383
09-5.434-5.4341.383-5.434
10-5.434-0.199-0.7460.994
11-1.7511.068-1.996-0.249
120.146-0.128-0.4530.283
13-0.1290.093-0.0060.029
Standard thresholds
P-value Threshold
0.001 0.66021
0.0005 2.289755
0.0001 5.74007