| Motif | HEY2.H12INVIVO.0.S.D |
| Gene (human) | HEY2 (GeneCards) |
| Gene synonyms (human) | BHLHB32, CHF1, GRL, HERP, HERP1, HRT2 |
| Gene (mouse) | Hey2 |
| Gene synonyms (mouse) | Chf1, Herp, Herp1, Hesr2, Hrt2 |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | HEY2.H12INVIVO.0.S.D |
| Gene (human) | HEY2 (GeneCards) |
| Gene synonyms (human) | BHLHB32, CHF1, GRL, HERP, HERP1, HRT2 |
| Gene (mouse) | Hey2 |
| Gene synonyms (mouse) | Chf1, Herp, Herp1, Hesr2, Hrt2 |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 13 |
| Consensus | nKGCACGTGYYnn |
| GC content | 63.41% |
| Information content (bits; total / per base) | 15.703 / 1.208 |
| Data sources | HT-SELEX |
| Aligned words | 1695 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Non-Methyl HT-SELEX, 5 experiments | median | 0.886 | 0.86 | 0.779 | 0.754 | 0.682 | 0.673 |
| best | 0.994 | 0.99 | 0.988 | 0.982 | 0.915 | 0.909 | |
| rSNP benchmarking, SNP-SELEX | auROC | auPRC | Pearson r | Kendall tau |
|---|---|---|---|---|
| batch 2 | 0.811 | 0.686 | 0.823 | 0.622 |
| TF superclass | Basic domains {1} (TFClass) |
| TF class | Basic helix-loop-helix factors (bHLH) {1.2} (TFClass) |
| TF family | Hairy-related {1.2.4} (TFClass) |
| TF subfamily | HAIRY {1.2.4.1} (TFClass) |
| TFClass ID | TFClass: 1.2.4.1.9 |
| HGNC | HGNC:4881 |
| MGI | MGI:1341884 |
| EntrezGene (human) | GeneID:23493 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:15214 (SSTAR profile) |
| UniProt ID (human) | HEY2_HUMAN |
| UniProt ID (mouse) | HEY2_MOUSE |
| UniProt AC (human) | Q9UBP5 (TFClass) |
| UniProt AC (mouse) | Q9QUS4 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 0 human, 0 mouse |
| HT-SELEX | 5 |
| Methyl-HT-SELEX | 0 |
| PCM | HEY2.H12INVIVO.0.S.D.pcm |
| PWM | HEY2.H12INVIVO.0.S.D.pwm |
| PFM | HEY2.H12INVIVO.0.S.D.pfm |
| Alignment | HEY2.H12INVIVO.0.S.D.words.tsv |
| Threshold to P-value map | HEY2.H12INVIVO.0.S.D.thr |
| Motif in other formats | |
| JASPAR format | HEY2.H12INVIVO.0.S.D_jaspar_format.txt |
| MEME format | HEY2.H12INVIVO.0.S.D_meme_format.meme |
| Transfac format | HEY2.H12INVIVO.0.S.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 435.75 | 347.75 | 538.75 | 372.75 |
| 02 | 110.5 | 192.5 | 1125.5 | 266.5 |
| 03 | 47.0 | 86.0 | 1534.0 | 28.0 |
| 04 | 0.0 | 1695.0 | 0.0 | 0.0 |
| 05 | 1695.0 | 0.0 | 0.0 | 0.0 |
| 06 | 0.0 | 1695.0 | 0.0 | 0.0 |
| 07 | 0.0 | 0.0 | 1695.0 | 0.0 |
| 08 | 0.0 | 0.0 | 0.0 | 1695.0 |
| 09 | 0.0 | 0.0 | 1695.0 | 0.0 |
| 10 | 0.0 | 347.0 | 200.0 | 1148.0 |
| 11 | 72.0 | 1237.0 | 56.0 | 330.0 |
| 12 | 490.75 | 372.75 | 268.75 | 562.75 |
| 13 | 372.25 | 465.25 | 421.25 | 436.25 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.257 | 0.205 | 0.318 | 0.22 |
| 02 | 0.065 | 0.114 | 0.664 | 0.157 |
| 03 | 0.028 | 0.051 | 0.905 | 0.017 |
| 04 | 0.0 | 1.0 | 0.0 | 0.0 |
| 05 | 1.0 | 0.0 | 0.0 | 0.0 |
| 06 | 0.0 | 1.0 | 0.0 | 0.0 |
| 07 | 0.0 | 0.0 | 1.0 | 0.0 |
| 08 | 0.0 | 0.0 | 0.0 | 1.0 |
| 09 | 0.0 | 0.0 | 1.0 | 0.0 |
| 10 | 0.0 | 0.205 | 0.118 | 0.677 |
| 11 | 0.042 | 0.73 | 0.033 | 0.195 |
| 12 | 0.29 | 0.22 | 0.159 | 0.332 |
| 13 | 0.22 | 0.274 | 0.249 | 0.257 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.028 | -0.197 | 0.239 | -0.128 |
| 02 | -1.332 | -0.784 | 0.974 | -0.461 |
| 03 | -2.165 | -1.578 | 1.283 | -2.657 |
| 04 | -5.434 | 1.383 | -5.434 | -5.434 |
| 05 | 1.383 | -5.434 | -5.434 | -5.434 |
| 06 | -5.434 | 1.383 | -5.434 | -5.434 |
| 07 | -5.434 | -5.434 | 1.383 | -5.434 |
| 08 | -5.434 | -5.434 | -5.434 | 1.383 |
| 09 | -5.434 | -5.434 | 1.383 | -5.434 |
| 10 | -5.434 | -0.199 | -0.746 | 0.994 |
| 11 | -1.751 | 1.068 | -1.996 | -0.249 |
| 12 | 0.146 | -0.128 | -0.453 | 0.283 |
| 13 | -0.129 | 0.093 | -0.006 | 0.029 |
| P-value | Threshold |
|---|---|
| 0.001 | 0.66021 |
| 0.0005 | 2.289755 |
| 0.0001 | 5.74007 |