MotifHEY1.H12INVIVO.0.S.D
Gene (human)HEY1
(GeneCards)
Gene synonyms (human)BHLHB31, CHF2, HERP2, HESR1, HRT1
Gene (mouse)Hey1
Gene synonyms (mouse)Herp2, Hesr1, Hrt1
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length12
ConsensusndGCACGTGbbn
GC content63.78%
Information content (bits; total / per base)14.119 / 1.177
Data sourcesHT-SELEX
Aligned words1826

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Non-Methyl HT-SELEX, 4 experiments median 0.887 0.875 0.774 0.768 0.68 0.683
best 0.963 0.945 0.895 0.871 0.798 0.78

rSNP benchmarking, SNP-SELEX auROC auPRC Pearson r Kendall tau
batch 1 0.994 0.85 0.957 0.472
batch 2 0.667 0.379 0.66 0.43
TF superclassBasic domains {1} (TFClass)
TF classBasic helix-loop-helix factors (bHLH) {1.2} (TFClass)
TF familyHairy-related {1.2.4} (TFClass)
TF subfamilyHAIRY {1.2.4.1} (TFClass)
TFClass IDTFClass: 1.2.4.1.8
HGNCHGNC:4880
MGIMGI:1341800
EntrezGene (human)GeneID:23462
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)HEY1_HUMAN
UniProt ID (mouse)HEY1_MOUSE
UniProt AC (human)Q9Y5J3
(TFClass)
UniProt AC (mouse)Q9WV93
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 0 mouse
HT-SELEX 4
Methyl-HT-SELEX 0
PCM
ACGT
01474.25327.25574.25450.25
02214.0142.0979.0491.0
0365.088.01610.063.0
041.01825.00.00.0
051826.00.00.00.0
060.01826.00.00.0
070.00.01826.00.0
080.013.00.01813.0
090.00.01824.02.0
10177.0434.0294.0921.0
11162.75915.75369.75377.75
12524.0449.0478.0375.0
PFM
ACGT
010.260.1790.3140.247
020.1170.0780.5360.269
030.0360.0480.8820.035
040.0010.9990.00.0
051.00.00.00.0
060.01.00.00.0
070.00.01.00.0
080.00.0070.00.993
090.00.00.9990.001
100.0970.2380.1610.504
110.0890.5020.2020.207
120.2870.2460.2620.205
PWM
ACGT
010.038-0.3310.229-0.014
02-0.753-1.1590.7610.073
03-1.925-1.6291.257-1.955
04-5.0711.383-5.498-5.498
051.383-5.498-5.498-5.498
06-5.4981.383-5.498-5.498
07-5.498-5.4981.383-5.498
08-5.498-3.428-5.4981.376
09-5.498-5.4981.382-4.773
10-0.941-0.05-0.4380.7
11-1.0240.694-0.21-0.189
120.137-0.0160.046-0.196
Standard thresholds
P-value Threshold
0.001 1.756885
0.0005 3.13631
0.0001 6.739565