| Motif | HEY1.H12INVIVO.0.S.D |
| Gene (human) | HEY1 (GeneCards) |
| Gene synonyms (human) | BHLHB31, CHF2, HERP2, HESR1, HRT1 |
| Gene (mouse) | Hey1 |
| Gene synonyms (mouse) | Herp2, Hesr1, Hrt1 |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | HEY1.H12INVIVO.0.S.D |
| Gene (human) | HEY1 (GeneCards) |
| Gene synonyms (human) | BHLHB31, CHF2, HERP2, HESR1, HRT1 |
| Gene (mouse) | Hey1 |
| Gene synonyms (mouse) | Herp2, Hesr1, Hrt1 |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 12 |
| Consensus | ndGCACGTGbbn |
| GC content | 63.78% |
| Information content (bits; total / per base) | 14.119 / 1.177 |
| Data sources | HT-SELEX |
| Aligned words | 1826 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Non-Methyl HT-SELEX, 4 experiments | median | 0.887 | 0.875 | 0.774 | 0.768 | 0.68 | 0.683 |
| best | 0.963 | 0.945 | 0.895 | 0.871 | 0.798 | 0.78 | |
| rSNP benchmarking, SNP-SELEX | auROC | auPRC | Pearson r | Kendall tau |
|---|---|---|---|---|
| batch 1 | 0.994 | 0.85 | 0.957 | 0.472 |
| batch 2 | 0.667 | 0.379 | 0.66 | 0.43 |
| TF superclass | Basic domains {1} (TFClass) |
| TF class | Basic helix-loop-helix factors (bHLH) {1.2} (TFClass) |
| TF family | Hairy-related {1.2.4} (TFClass) |
| TF subfamily | HAIRY {1.2.4.1} (TFClass) |
| TFClass ID | TFClass: 1.2.4.1.8 |
| HGNC | HGNC:4880 |
| MGI | MGI:1341800 |
| EntrezGene (human) | GeneID:23462 (SSTAR profile) |
| EntrezGene (mouse) | |
| UniProt ID (human) | HEY1_HUMAN |
| UniProt ID (mouse) | HEY1_MOUSE |
| UniProt AC (human) | Q9Y5J3 (TFClass) |
| UniProt AC (mouse) | Q9WV93 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 0 human, 0 mouse |
| HT-SELEX | 4 |
| Methyl-HT-SELEX | 0 |
| PCM | HEY1.H12INVIVO.0.S.D.pcm |
| PWM | HEY1.H12INVIVO.0.S.D.pwm |
| PFM | HEY1.H12INVIVO.0.S.D.pfm |
| Alignment | HEY1.H12INVIVO.0.S.D.words.tsv |
| Threshold to P-value map | HEY1.H12INVIVO.0.S.D.thr |
| Motif in other formats | |
| JASPAR format | HEY1.H12INVIVO.0.S.D_jaspar_format.txt |
| MEME format | HEY1.H12INVIVO.0.S.D_meme_format.meme |
| Transfac format | HEY1.H12INVIVO.0.S.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 474.25 | 327.25 | 574.25 | 450.25 |
| 02 | 214.0 | 142.0 | 979.0 | 491.0 |
| 03 | 65.0 | 88.0 | 1610.0 | 63.0 |
| 04 | 1.0 | 1825.0 | 0.0 | 0.0 |
| 05 | 1826.0 | 0.0 | 0.0 | 0.0 |
| 06 | 0.0 | 1826.0 | 0.0 | 0.0 |
| 07 | 0.0 | 0.0 | 1826.0 | 0.0 |
| 08 | 0.0 | 13.0 | 0.0 | 1813.0 |
| 09 | 0.0 | 0.0 | 1824.0 | 2.0 |
| 10 | 177.0 | 434.0 | 294.0 | 921.0 |
| 11 | 162.75 | 915.75 | 369.75 | 377.75 |
| 12 | 524.0 | 449.0 | 478.0 | 375.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.26 | 0.179 | 0.314 | 0.247 |
| 02 | 0.117 | 0.078 | 0.536 | 0.269 |
| 03 | 0.036 | 0.048 | 0.882 | 0.035 |
| 04 | 0.001 | 0.999 | 0.0 | 0.0 |
| 05 | 1.0 | 0.0 | 0.0 | 0.0 |
| 06 | 0.0 | 1.0 | 0.0 | 0.0 |
| 07 | 0.0 | 0.0 | 1.0 | 0.0 |
| 08 | 0.0 | 0.007 | 0.0 | 0.993 |
| 09 | 0.0 | 0.0 | 0.999 | 0.001 |
| 10 | 0.097 | 0.238 | 0.161 | 0.504 |
| 11 | 0.089 | 0.502 | 0.202 | 0.207 |
| 12 | 0.287 | 0.246 | 0.262 | 0.205 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.038 | -0.331 | 0.229 | -0.014 |
| 02 | -0.753 | -1.159 | 0.761 | 0.073 |
| 03 | -1.925 | -1.629 | 1.257 | -1.955 |
| 04 | -5.071 | 1.383 | -5.498 | -5.498 |
| 05 | 1.383 | -5.498 | -5.498 | -5.498 |
| 06 | -5.498 | 1.383 | -5.498 | -5.498 |
| 07 | -5.498 | -5.498 | 1.383 | -5.498 |
| 08 | -5.498 | -3.428 | -5.498 | 1.376 |
| 09 | -5.498 | -5.498 | 1.382 | -4.773 |
| 10 | -0.941 | -0.05 | -0.438 | 0.7 |
| 11 | -1.024 | 0.694 | -0.21 | -0.189 |
| 12 | 0.137 | -0.016 | 0.046 | -0.196 |
| P-value | Threshold |
|---|---|
| 0.001 | 1.756885 |
| 0.0005 | 3.13631 |
| 0.0001 | 6.739565 |