| Motif | HES7.H12INVIVO.0.S.D |
| Gene (human) | HES7 (GeneCards) |
| Gene synonyms (human) | BHLHB37 |
| Gene (mouse) | Hes7 |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | HES7.H12INVIVO.0.S.D |
| Gene (human) | HES7 (GeneCards) |
| Gene synonyms (human) | BHLHB37 |
| Gene (mouse) | Hes7 |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 10 |
| Consensus | nvRCACGTRn |
| GC content | 61.59% |
| Information content (bits; total / per base) | 10.389 / 1.039 |
| Data sources | HT-SELEX |
| Aligned words | 2156 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Non-Methyl HT-SELEX, 2 experiments | median | 0.805 | 0.807 | 0.781 | 0.78 | 0.768 | 0.767 |
| best | 0.998 | 0.997 | 0.997 | 0.995 | 0.994 | 0.992 | |
| TF superclass | Basic domains {1} (TFClass) |
| TF class | Basic helix-loop-helix factors (bHLH) {1.2} (TFClass) |
| TF family | Hairy-related {1.2.4} (TFClass) |
| TF subfamily | HAIRY {1.2.4.1} (TFClass) |
| TFClass ID | TFClass: 1.2.4.1.7 |
| HGNC | HGNC:15977 |
| MGI | MGI:2135679 |
| EntrezGene (human) | GeneID:84667 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:84653 (SSTAR profile) |
| UniProt ID (human) | HES7_HUMAN |
| UniProt ID (mouse) | HES7_MOUSE |
| UniProt AC (human) | Q9BYE0 (TFClass) |
| UniProt AC (mouse) | Q8BKT2 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 0 human, 0 mouse |
| HT-SELEX | 2 |
| Methyl-HT-SELEX | 0 |
| PCM | HES7.H12INVIVO.0.S.D.pcm |
| PWM | HES7.H12INVIVO.0.S.D.pwm |
| PFM | HES7.H12INVIVO.0.S.D.pfm |
| Alignment | HES7.H12INVIVO.0.S.D.words.tsv |
| Threshold to P-value map | HES7.H12INVIVO.0.S.D.thr |
| Motif in other formats | |
| JASPAR format | HES7.H12INVIVO.0.S.D_jaspar_format.txt |
| MEME format | HES7.H12INVIVO.0.S.D_meme_format.meme |
| Transfac format | HES7.H12INVIVO.0.S.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 530.0 | 601.0 | 404.0 | 621.0 |
| 02 | 350.0 | 279.0 | 1275.0 | 252.0 |
| 03 | 655.0 | 116.0 | 1355.0 | 30.0 |
| 04 | 101.0 | 2043.0 | 12.0 | 0.0 |
| 05 | 2156.0 | 0.0 | 0.0 | 0.0 |
| 06 | 0.0 | 2155.0 | 0.0 | 1.0 |
| 07 | 29.0 | 2.0 | 2113.0 | 12.0 |
| 08 | 124.25 | 134.25 | 85.25 | 1812.25 |
| 09 | 324.75 | 158.75 | 1434.75 | 237.75 |
| 10 | 336.5 | 573.5 | 537.5 | 708.5 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.246 | 0.279 | 0.187 | 0.288 |
| 02 | 0.162 | 0.129 | 0.591 | 0.117 |
| 03 | 0.304 | 0.054 | 0.628 | 0.014 |
| 04 | 0.047 | 0.948 | 0.006 | 0.0 |
| 05 | 1.0 | 0.0 | 0.0 | 0.0 |
| 06 | 0.0 | 1.0 | 0.0 | 0.0 |
| 07 | 0.013 | 0.001 | 0.98 | 0.006 |
| 08 | 0.058 | 0.062 | 0.04 | 0.841 |
| 09 | 0.151 | 0.074 | 0.665 | 0.11 |
| 10 | 0.156 | 0.266 | 0.249 | 0.329 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.017 | 0.109 | -0.287 | 0.141 |
| 02 | -0.43 | -0.655 | 0.859 | -0.756 |
| 03 | 0.194 | -1.523 | 0.92 | -2.83 |
| 04 | -1.659 | 1.33 | -3.66 | -5.641 |
| 05 | 1.384 | -5.641 | -5.641 | -5.641 |
| 06 | -5.641 | 1.383 | -5.641 | -5.222 |
| 07 | -2.862 | -4.927 | 1.364 | -3.66 |
| 08 | -1.456 | -1.379 | -1.825 | 1.21 |
| 09 | -0.504 | -1.214 | 0.977 | -0.814 |
| 10 | -0.469 | 0.062 | -0.003 | 0.273 |
| P-value | Threshold |
|---|---|
| 0.001 | 4.77753 |
| 0.0005 | 5.712825 |
| 0.0001 | 7.57598 |