MotifGLI4.H12CORE.0.P.C
Gene (human)GLI4
(GeneCards)
Gene synonyms (human)HKR4
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length23
ConsensusYbnbbnYdbChYTCvRKKCYhhb
GC content55.33%
Information content (bits; total / per base)11.286 / 0.491
Data sourcesChIP-Seq
Aligned words998

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (5) 0.663 0.68 0.531 0.56 0.75 0.764 4.424 4.643 40.509 49.456
TF superclassZinc-coordinating DNA-binding domains {2} (TFClass)
TF classC2H2 zinc finger factors {2.3} (TFClass)
TF familyMore than 3 adjacent zinc fingers {2.3.3} (TFClass)
TF subfamilyZNF24-like {2.3.3.10} (TFClass)
TFClass IDTFClass: 2.3.3.10.4
HGNCHGNC:4320
MGI
EntrezGene (human)GeneID:2738
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)GLI4_HUMAN
UniProt ID (mouse)
UniProt AC (human)P10075
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0158.0208.0117.0615.0
0285.0154.0439.0320.0
03313.0178.0257.0250.0
04128.0216.0309.0345.0
0534.0445.0334.0185.0
06240.0329.0129.0300.0
0742.0239.0114.0603.0
08103.072.0464.0359.0
0960.0305.0505.0128.0
1030.0834.054.080.0
11525.0225.0104.0144.0
1226.0190.062.0720.0
1319.0154.017.0808.0
1418.0895.050.035.0
15474.0253.0188.083.0
16577.0132.0227.062.0
1774.0103.0632.0189.0
1825.047.0614.0312.0
1956.0818.036.088.0
2084.0688.039.0187.0
21176.0459.0100.0263.0
22164.0304.0116.0414.0
23100.0251.0295.0352.0
PFM
ACGT
010.0580.2080.1170.616
020.0850.1540.440.321
030.3140.1780.2580.251
040.1280.2160.310.346
050.0340.4460.3350.185
060.240.330.1290.301
070.0420.2390.1140.604
080.1030.0720.4650.36
090.060.3060.5060.128
100.030.8360.0540.08
110.5260.2250.1040.144
120.0260.190.0620.721
130.0190.1540.0170.81
140.0180.8970.050.035
150.4750.2540.1880.083
160.5780.1320.2270.062
170.0740.1030.6330.189
180.0250.0470.6150.313
190.0560.820.0360.088
200.0840.6890.0390.187
210.1760.460.10.264
220.1640.3050.1160.415
230.10.2520.2960.353
PWM
ACGT
01-1.437-0.181-0.750.898
02-1.064-0.4780.5620.247
030.225-0.3350.0290.002
04-0.661-0.1430.2130.322
05-1.950.5760.29-0.297
06-0.0390.275-0.6530.183
07-1.748-0.043-0.7750.878
08-0.875-1.2260.6170.362
09-1.4040.20.702-0.661
10-2.0691.202-1.506-1.123
110.74-0.103-0.865-0.545
12-2.204-0.27-1.3721.055
13-2.495-0.478-2.5961.17
14-2.5441.272-1.58-1.923
150.6380.014-0.281-1.087
160.834-0.631-0.094-1.372
17-1.199-0.8750.925-0.276
18-2.241-1.640.8960.222
19-1.4711.183-1.896-1.03
20-1.0751.01-1.819-0.286
21-0.3460.606-0.9040.052
22-0.4160.196-0.7580.504
23-0.9040.0060.1660.342
Standard thresholds
P-value Threshold
0.001 4.43066
0.0005 5.27661
0.0001 7.06111