| Motif | FOXP3.H12INVITRO.0.P.D |
| Gene (human) | FOXP3 (GeneCards) |
| Gene synonyms (human) | IPEX |
| Gene (mouse) | Foxp3 |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | FOXP3.H12INVITRO.0.P.D |
| Gene (human) | FOXP3 (GeneCards) |
| Gene synonyms (human) | IPEX |
| Gene (mouse) | Foxp3 |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 10 |
| Consensus | bbbTGTTTdY |
| GC content | 36.32% |
| Information content (bits; total / per base) | 8.789 / 0.879 |
| Data sources | ChIP-Seq |
| Aligned words | 997 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Mouse | 4 (24) | 0.61 | 0.737 | 0.419 | 0.585 | 0.693 | 0.791 | 1.894 | 2.566 | 4.64 | 75.143 |
| TF superclass | Helix-turn-helix domains {3} (TFClass) |
| TF class | Fork head/winged helix factors {3.3} (TFClass) |
| TF family | FOX {3.3.1} (TFClass) |
| TF subfamily | FOXP {3.3.1.16} (TFClass) |
| TFClass ID | TFClass: 3.3.1.16.3 |
| HGNC | HGNC:6106 |
| MGI | MGI:1891436 |
| EntrezGene (human) | GeneID:50943 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:20371 (SSTAR profile) |
| UniProt ID (human) | FOXP3_HUMAN |
| UniProt ID (mouse) | FOXP3_MOUSE |
| UniProt AC (human) | Q9BZS1 (TFClass) |
| UniProt AC (mouse) | Q99JB6 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 0 human, 4 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | FOXP3.H12INVITRO.0.P.D.pcm |
| PWM | FOXP3.H12INVITRO.0.P.D.pwm |
| PFM | FOXP3.H12INVITRO.0.P.D.pfm |
| Alignment | FOXP3.H12INVITRO.0.P.D.words.tsv |
| Threshold to P-value map | FOXP3.H12INVITRO.0.P.D.thr |
| Motif in other formats | |
| JASPAR format | FOXP3.H12INVITRO.0.P.D_jaspar_format.txt |
| MEME format | FOXP3.H12INVITRO.0.P.D_meme_format.meme |
| Transfac format | FOXP3.H12INVITRO.0.P.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 110.0 | 190.0 | 273.0 | 424.0 |
| 02 | 50.0 | 296.0 | 223.0 | 428.0 |
| 03 | 49.0 | 319.0 | 123.0 | 506.0 |
| 04 | 5.0 | 10.0 | 22.0 | 960.0 |
| 05 | 37.0 | 48.0 | 888.0 | 24.0 |
| 06 | 9.0 | 33.0 | 19.0 | 936.0 |
| 07 | 8.0 | 13.0 | 86.0 | 890.0 |
| 08 | 19.0 | 11.0 | 118.0 | 849.0 |
| 09 | 352.0 | 124.0 | 248.0 | 273.0 |
| 10 | 14.0 | 497.0 | 80.0 | 406.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.11 | 0.191 | 0.274 | 0.425 |
| 02 | 0.05 | 0.297 | 0.224 | 0.429 |
| 03 | 0.049 | 0.32 | 0.123 | 0.508 |
| 04 | 0.005 | 0.01 | 0.022 | 0.963 |
| 05 | 0.037 | 0.048 | 0.891 | 0.024 |
| 06 | 0.009 | 0.033 | 0.019 | 0.939 |
| 07 | 0.008 | 0.013 | 0.086 | 0.893 |
| 08 | 0.019 | 0.011 | 0.118 | 0.852 |
| 09 | 0.353 | 0.124 | 0.249 | 0.274 |
| 10 | 0.014 | 0.498 | 0.08 | 0.407 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.809 | -0.269 | 0.09 | 0.528 |
| 02 | -1.579 | 0.171 | -0.11 | 0.538 |
| 03 | -1.599 | 0.245 | -0.699 | 0.705 |
| 04 | -3.619 | -3.064 | -2.359 | 1.343 |
| 05 | -1.869 | -1.619 | 1.266 | -2.278 |
| 06 | -3.153 | -1.978 | -2.494 | 1.318 |
| 07 | -3.251 | -2.836 | -1.051 | 1.268 |
| 08 | -2.494 | -2.982 | -0.74 | 1.221 |
| 09 | 0.343 | -0.691 | -0.005 | 0.09 |
| 10 | -2.77 | 0.687 | -1.122 | 0.485 |
| P-value | Threshold |
|---|---|
| 0.001 | 4.929815 |
| 0.0005 | 5.74237 |
| 0.0001 | 7.46888 |