MotifFOXP3.H12INVITRO.0.P.D
Gene (human)FOXP3
(GeneCards)
Gene synonyms (human)IPEX
Gene (mouse)Foxp3
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length10
ConsensusbbbTGTTTdY
GC content36.32%
Information content (bits; total / per base)8.789 / 0.879
Data sourcesChIP-Seq
Aligned words997

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Mouse 4 (24) 0.61 0.737 0.419 0.585 0.693 0.791 1.894 2.566 4.64 75.143
TF superclassHelix-turn-helix domains {3} (TFClass)
TF classFork head/winged helix factors {3.3} (TFClass)
TF familyFOX {3.3.1} (TFClass)
TF subfamilyFOXP {3.3.1.16} (TFClass)
TFClass IDTFClass: 3.3.1.16.3
HGNCHGNC:6106
MGIMGI:1891436
EntrezGene (human)GeneID:50943
(SSTAR profile)
EntrezGene (mouse)GeneID:20371
(SSTAR profile)
UniProt ID (human)FOXP3_HUMAN
UniProt ID (mouse)FOXP3_MOUSE
UniProt AC (human)Q9BZS1
(TFClass)
UniProt AC (mouse)Q99JB6
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 4 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01110.0190.0273.0424.0
0250.0296.0223.0428.0
0349.0319.0123.0506.0
045.010.022.0960.0
0537.048.0888.024.0
069.033.019.0936.0
078.013.086.0890.0
0819.011.0118.0849.0
09352.0124.0248.0273.0
1014.0497.080.0406.0
PFM
ACGT
010.110.1910.2740.425
020.050.2970.2240.429
030.0490.320.1230.508
040.0050.010.0220.963
050.0370.0480.8910.024
060.0090.0330.0190.939
070.0080.0130.0860.893
080.0190.0110.1180.852
090.3530.1240.2490.274
100.0140.4980.080.407
PWM
ACGT
01-0.809-0.2690.090.528
02-1.5790.171-0.110.538
03-1.5990.245-0.6990.705
04-3.619-3.064-2.3591.343
05-1.869-1.6191.266-2.278
06-3.153-1.978-2.4941.318
07-3.251-2.836-1.0511.268
08-2.494-2.982-0.741.221
090.343-0.691-0.0050.09
10-2.770.687-1.1220.485
Standard thresholds
P-value Threshold
0.001 4.929815
0.0005 5.74237
0.0001 7.46888