MotifFOXO6.H12INVITRO.0.S.B
Gene (human)FOXO6
(GeneCards)
Gene synonyms (human)
Gene (mouse)Foxo6
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length12
ConsensusnbdTGTTTAYdn
GC content35.42%
Information content (bits; total / per base)11.854 / 0.988
Data sourcesHT-SELEX
Aligned words9701

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Non-Methyl HT-SELEX, 2 experiments median 0.955 0.937 0.844 0.831 0.695 0.712
best 0.969 0.958 0.866 0.855 0.707 0.728

rSNP benchmarking, SNP-SELEX auROC auPRC Pearson r Kendall tau
batch 2 0.597 0.278 0.476 0.359
TF superclassHelix-turn-helix domains {3} (TFClass)
TF classFork head/winged helix factors {3.3} (TFClass)
TF familyFOX {3.3.1} (TFClass)
TF subfamilyFOXO {3.3.1.15} (TFClass)
TFClass IDTFClass: 3.3.1.15.5
HGNCHGNC:24814
MGIMGI:2676586
EntrezGene (human)
EntrezGene (mouse)GeneID:329934
(SSTAR profile)
UniProt ID (human)FOXO6_HUMAN
UniProt ID (mouse)FOXO6_MOUSE
UniProt AC (human)A8MYZ6
(TFClass)
UniProt AC (mouse)Q70KY4
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 0 mouse
HT-SELEX 2
Methyl-HT-SELEX 0
PCM
ACGT
012740.02108.01834.03019.0
021300.54002.52881.51516.5
033046.0758.01430.04467.0
0460.0144.047.09450.0
05138.066.09494.03.0
066.030.01.09664.0
070.03.06.09692.0
086.077.01427.08191.0
098604.0179.0112.0806.0
1074.07195.0287.02145.0
112336.251644.253850.251870.25
122306.252054.251602.253738.25
PFM
ACGT
010.2820.2170.1890.311
020.1340.4130.2970.156
030.3140.0780.1470.46
040.0060.0150.0050.974
050.0140.0070.9790.0
060.0010.0030.00.996
070.00.00.0010.999
080.0010.0080.1470.844
090.8870.0180.0120.083
100.0080.7420.030.221
110.2410.1690.3970.193
120.2380.2120.1650.385
PWM
ACGT
010.122-0.14-0.2790.219
02-0.6220.5010.172-0.469
030.228-1.161-0.5280.61
04-3.663-2.809-3.8971.359
05-2.851-3.5711.364-6.128
06-5.679-4.32-6.6021.382
07-6.964-6.128-5.6791.385
08-5.679-3.421-0.531.216
091.266-2.595-3.056-1.1
10-3.461.087-2.127-0.123
11-0.037-0.3880.462-0.26
12-0.05-0.166-0.4140.432
Standard thresholds
P-value Threshold
0.001 3.82423
0.0005 4.997015
0.0001 7.58413