MotifFOXM1.H12CORE.0.P.B
Gene (human)FOXM1
(GeneCards)
Gene synonyms (human)FKHL16, HFH11, MPP2, WIN
Gene (mouse)Foxm1
Gene synonyms (mouse)Fkh16
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length12
ConsensusTRTTTRYWbWdn
GC content32.04%
Information content (bits; total / per base)10.21 / 0.851
Data sourcesChIP-Seq
Aligned words1010

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 5 (27) 0.685 0.797 0.558 0.679 0.736 0.856 2.311 2.977 37.854 68.553
TF superclassHelix-turn-helix domains {3} (TFClass)
TF classFork head/winged helix factors {3.3} (TFClass)
TF familyFOX {3.3.1} (TFClass)
TF subfamilyFOXM {3.3.1.13} (TFClass)
TFClass IDTFClass: 3.3.1.13.1
HGNCHGNC:3818
MGIMGI:1347487
EntrezGene (human)GeneID:2305
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)FOXM1_HUMAN
UniProt ID (mouse)FOXM1_MOUSE
UniProt AC (human)Q08050
(TFClass)
UniProt AC (mouse)O08696
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 5 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0131.013.015.0951.0
02328.017.0663.02.0
0333.028.030.0919.0
048.025.054.0923.0
056.07.0106.0891.0
06483.041.0434.052.0
0742.0754.012.0202.0
08272.0132.09.0597.0
0948.0316.0130.0516.0
10439.024.016.0531.0
11225.0138.0377.0270.0
12201.0261.0281.0267.0
PFM
ACGT
010.0310.0130.0150.942
020.3250.0170.6560.002
030.0330.0280.030.91
040.0080.0250.0530.914
050.0060.0070.1050.882
060.4780.0410.430.051
070.0420.7470.0120.2
080.2690.1310.0090.591
090.0480.3130.1290.511
100.4350.0240.0160.526
110.2230.1370.3730.267
120.1990.2580.2780.264
PWM
ACGT
01-2.05-2.848-2.7211.321
020.26-2.6080.961-4.222
03-1.991-2.146-2.0811.287
04-3.263-2.252-1.5181.291
05-3.493-3.372-0.8591.256
060.645-1.7830.539-1.554
07-1.761.089-2.919-0.221
080.074-0.642-3.1650.857
09-1.6320.223-0.6570.711
100.55-2.291-2.6630.74
11-0.114-0.5990.3990.067
12-0.2260.0330.1060.055
Standard thresholds
P-value Threshold
0.001 4.685615
0.0005 5.549785
0.0001 7.318755