MotifFOXL1.H12INVIVO.0.S.D
Gene (human)FOXL1
(GeneCards)
Gene synonyms (human)FKHL11, FREAC7
Gene (mouse)Foxl1
Gene synonyms (mouse)Fkh6, Fkhl11
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length20
ConsensusbndTRTTTGTTTAYWWdhnn
GC content26.87%
Information content (bits; total / per base)17.812 / 0.891
Data sourcesHT-SELEX
Aligned words7137

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Non-Methyl HT-SELEX, 2 experiments median 0.993 0.99 0.911 0.917 0.711 0.764
best 0.999 0.999 0.99 0.988 0.782 0.832
TF superclassHelix-turn-helix domains {3} (TFClass)
TF classFork head/winged helix factors {3.3} (TFClass)
TF familyFOX {3.3.1} (TFClass)
TF subfamilyFOXL {3.3.1.12} (TFClass)
TFClass IDTFClass: 3.3.1.12.1
HGNCHGNC:3817
MGIMGI:1347469
EntrezGene (human)GeneID:2300
(SSTAR profile)
EntrezGene (mouse)GeneID:14241
(SSTAR profile)
UniProt ID (human)FOXL1_HUMAN
UniProt ID (mouse)FOXL1_MOUSE
UniProt AC (human)Q12952
(TFClass)
UniProt AC (mouse)Q64731
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 0 mouse
HT-SELEX 2
Methyl-HT-SELEX 0
PCM
ACGT
011225.01327.02811.01774.0
021486.751067.752359.752222.75
031182.0788.02048.03119.0
04278.0370.0482.06007.0
051359.0422.04915.0441.0
06641.0103.0183.06210.0
07308.025.039.06765.0
080.01.01.07135.0
092961.01.04175.00.0
100.019.00.07118.0
119.03.03.07122.0
1211.02.0171.06953.0
136521.030.0449.0137.0
14279.02599.088.04171.0
152406.0496.0572.03663.0
161377.0555.0500.04705.0
172538.0522.0547.03530.0
181211.02296.0760.02870.0
191542.52436.51204.51953.5
201377.02704.01284.01772.0
PFM
ACGT
010.1720.1860.3940.249
020.2080.150.3310.311
030.1660.110.2870.437
040.0390.0520.0680.842
050.190.0590.6890.062
060.090.0140.0260.87
070.0430.0040.0050.948
080.00.00.01.0
090.4150.00.5850.0
100.00.0030.00.997
110.0010.00.00.998
120.0020.00.0240.974
130.9140.0040.0630.019
140.0390.3640.0120.584
150.3370.0690.080.513
160.1930.0780.070.659
170.3560.0730.0770.495
180.170.3220.1060.402
190.2160.3410.1690.274
200.1930.3790.180.248
PWM
ACGT
01-0.375-0.2960.454-0.006
02-0.182-0.5130.2790.22
03-0.411-0.8160.1380.558
04-1.852-1.569-1.3051.213
05-0.272-1.4381.013-1.394
06-1.022-2.832-2.2661.246
07-1.751-4.184-3.7691.332
08-6.691-6.319-6.3191.385
090.506-6.3190.849-6.691
10-6.691-4.433-6.6911.383
11-5.07-5.836-5.8361.383
12-4.906-6.049-2.3331.359
131.295-4.015-1.376-2.552
14-1.8490.376-2.9860.848
150.299-1.277-1.1350.719
16-0.259-1.165-1.2690.969
170.352-1.226-1.1790.682
18-0.3870.252-0.8520.475
19-0.1450.311-0.3920.091
20-0.2590.415-0.329-0.007
Standard thresholds
P-value Threshold
0.001 0.19491
0.0005 1.83511
0.0001 5.20296