| Motif | FOXH1.H12INVITRO.0.P.D |
| Gene (human) | FOXH1 (GeneCards) |
| Gene synonyms (human) | FAST1, FAST2 |
| Gene (mouse) | Foxh1 |
| Gene synonyms (mouse) | Fast1, Fast2 |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | FOXH1.H12INVITRO.0.P.D |
| Gene (human) | FOXH1 (GeneCards) |
| Gene synonyms (human) | FAST1, FAST2 |
| Gene (mouse) | Foxh1 |
| Gene synonyms (mouse) | Fast1, Fast2 |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 9 |
| Consensus | TGTGGATTb |
| GC content | 40.76% |
| Information content (bits; total / per base) | 12.451 / 1.383 |
| Data sources | ChIP-Seq |
| Aligned words | 1004 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 2 (14) | 0.931 | 0.945 | 0.875 | 0.898 | 0.932 | 0.946 | 3.824 | 4.013 | 560.58 | 605.0 |
| TF superclass | Helix-turn-helix domains {3} (TFClass) |
| TF class | Fork head/winged helix factors {3.3} (TFClass) |
| TF family | FOX {3.3.1} (TFClass) |
| TF subfamily | FOXH {3.3.1.8} (TFClass) |
| TFClass ID | TFClass: 3.3.1.8.1 |
| HGNC | HGNC:3814 |
| MGI | MGI:1347465 |
| EntrezGene (human) | GeneID:8928 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:14106 (SSTAR profile) |
| UniProt ID (human) | FOXH1_HUMAN |
| UniProt ID (mouse) | FOXH1_MOUSE |
| UniProt AC (human) | O75593 (TFClass) |
| UniProt AC (mouse) | O88621 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 2 human, 0 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | FOXH1.H12INVITRO.0.P.D.pcm |
| PWM | FOXH1.H12INVITRO.0.P.D.pwm |
| PFM | FOXH1.H12INVITRO.0.P.D.pfm |
| Alignment | FOXH1.H12INVITRO.0.P.D.words.tsv |
| Threshold to P-value map | FOXH1.H12INVITRO.0.P.D.thr |
| Motif in other formats | |
| JASPAR format | FOXH1.H12INVITRO.0.P.D_jaspar_format.txt |
| MEME format | FOXH1.H12INVITRO.0.P.D_meme_format.meme |
| Transfac format | FOXH1.H12INVITRO.0.P.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 113.0 | 31.0 | 47.0 | 813.0 |
| 02 | 1.0 | 0.0 | 1003.0 | 0.0 |
| 03 | 5.0 | 18.0 | 6.0 | 975.0 |
| 04 | 7.0 | 1.0 | 872.0 | 124.0 |
| 05 | 1.0 | 2.0 | 773.0 | 228.0 |
| 06 | 973.0 | 8.0 | 1.0 | 22.0 |
| 07 | 42.0 | 18.0 | 31.0 | 913.0 |
| 08 | 5.0 | 65.0 | 2.0 | 932.0 |
| 09 | 96.0 | 393.0 | 412.0 | 103.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.113 | 0.031 | 0.047 | 0.81 |
| 02 | 0.001 | 0.0 | 0.999 | 0.0 |
| 03 | 0.005 | 0.018 | 0.006 | 0.971 |
| 04 | 0.007 | 0.001 | 0.869 | 0.124 |
| 05 | 0.001 | 0.002 | 0.77 | 0.227 |
| 06 | 0.969 | 0.008 | 0.001 | 0.022 |
| 07 | 0.042 | 0.018 | 0.031 | 0.909 |
| 08 | 0.005 | 0.065 | 0.002 | 0.928 |
| 09 | 0.096 | 0.391 | 0.41 | 0.103 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.79 | -2.044 | -1.646 | 1.171 |
| 02 | -4.529 | -4.985 | 1.38 | -4.985 |
| 03 | -3.626 | -2.55 | -3.487 | 1.352 |
| 04 | -3.366 | -4.529 | 1.24 | -0.698 |
| 05 | -4.529 | -4.216 | 1.12 | -0.095 |
| 06 | 1.35 | -3.257 | -4.529 | -2.366 |
| 07 | -1.754 | -2.55 | -2.044 | 1.286 |
| 08 | -3.626 | -1.332 | -4.216 | 1.307 |
| 09 | -0.95 | 0.446 | 0.493 | -0.881 |
| P-value | Threshold |
|---|---|
| 0.001 | 3.760735 |
| 0.0005 | 4.88041 |
| 0.0001 | 7.3461 |