| Motif | FOSL1.H12RSNP.0.P.B |
| Gene (human) | FOSL1 (GeneCards) |
| Gene synonyms (human) | FRA1 |
| Gene (mouse) | Fosl1 |
| Gene synonyms (mouse) | Fra1 |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | B |
| Motif | FOSL1.H12RSNP.0.P.B |
| Gene (human) | FOSL1 (GeneCards) |
| Gene synonyms (human) | FRA1 |
| Gene (mouse) | Fosl1 |
| Gene synonyms (mouse) | Fra1 |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | B |
| Motif length | 11 |
| Consensus | vTGAGTCAbnn |
| GC content | 45.6% |
| Information content (bits; total / per base) | 13.921 / 1.266 |
| Data sources | ChIP-Seq |
| Aligned words | 1000 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 9 (61) | 0.954 | 0.986 | 0.91 | 0.965 | 0.952 | 0.984 | 4.119 | 4.925 | 388.602 | 642.222 |
| Mouse | 4 (28) | 0.946 | 0.976 | 0.902 | 0.951 | 0.941 | 0.973 | 3.955 | 4.508 | 359.659 | 452.125 |
| rSNP benchmarking, ADASTRA | odds-ratio | -log-Fisher's P | Pearson r | Kendall tau |
|---|---|---|---|---|
| # | 100.0 | 3.87 | 0.377 | 0.257 |
| TF superclass | Basic domains {1} (TFClass) |
| TF class | Basic leucine zipper factors (bZIP) {1.1} (TFClass) |
| TF family | Fos-related {1.1.2} (TFClass) |
| TF subfamily | Fos {1.1.2.1} (TFClass) |
| TFClass ID | TFClass: 1.1.2.1.3 |
| HGNC | HGNC:13718 |
| MGI | MGI:107179 |
| EntrezGene (human) | GeneID:8061 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:14283 (SSTAR profile) |
| UniProt ID (human) | FOSL1_HUMAN |
| UniProt ID (mouse) | FOSL1_MOUSE |
| UniProt AC (human) | P15407 (TFClass) |
| UniProt AC (mouse) | P48755 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 9 human, 4 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | FOSL1.H12RSNP.0.P.B.pcm |
| PWM | FOSL1.H12RSNP.0.P.B.pwm |
| PFM | FOSL1.H12RSNP.0.P.B.pfm |
| Alignment | FOSL1.H12RSNP.0.P.B.words.tsv |
| Threshold to P-value map | FOSL1.H12RSNP.0.P.B.thr |
| Motif in other formats | |
| JASPAR format | FOSL1.H12RSNP.0.P.B_jaspar_format.txt |
| MEME format | FOSL1.H12RSNP.0.P.B_meme_format.meme |
| Transfac format | FOSL1.H12RSNP.0.P.B_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 467.0 | 225.0 | 276.0 | 32.0 |
| 02 | 1.0 | 0.0 | 3.0 | 996.0 |
| 03 | 0.0 | 0.0 | 948.0 | 52.0 |
| 04 | 990.0 | 3.0 | 1.0 | 6.0 |
| 05 | 0.0 | 0.0 | 945.0 | 55.0 |
| 06 | 0.0 | 0.0 | 0.0 | 1000.0 |
| 07 | 12.0 | 987.0 | 1.0 | 0.0 |
| 08 | 995.0 | 3.0 | 1.0 | 1.0 |
| 09 | 24.0 | 336.0 | 166.0 | 474.0 |
| 10 | 248.0 | 329.0 | 180.0 | 243.0 |
| 11 | 231.0 | 331.0 | 281.0 | 157.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.467 | 0.225 | 0.276 | 0.032 |
| 02 | 0.001 | 0.0 | 0.003 | 0.996 |
| 03 | 0.0 | 0.0 | 0.948 | 0.052 |
| 04 | 0.99 | 0.003 | 0.001 | 0.006 |
| 05 | 0.0 | 0.0 | 0.945 | 0.055 |
| 06 | 0.0 | 0.0 | 0.0 | 1.0 |
| 07 | 0.012 | 0.987 | 0.001 | 0.0 |
| 08 | 0.995 | 0.003 | 0.001 | 0.001 |
| 09 | 0.024 | 0.336 | 0.166 | 0.474 |
| 10 | 0.248 | 0.329 | 0.18 | 0.243 |
| 11 | 0.231 | 0.331 | 0.281 | 0.157 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.622 | -0.105 | 0.098 | -2.01 |
| 02 | -4.525 | -4.982 | -3.975 | 1.377 |
| 03 | -4.982 | -4.982 | 1.328 | -1.544 |
| 04 | 1.371 | -3.975 | -4.525 | -3.484 |
| 05 | -4.982 | -4.982 | 1.325 | -1.49 |
| 06 | -4.982 | -4.982 | -4.982 | 1.381 |
| 07 | -2.909 | 1.368 | -4.525 | -4.982 |
| 08 | 1.376 | -3.975 | -4.525 | -4.525 |
| 09 | -2.281 | 0.294 | -0.406 | 0.636 |
| 10 | -0.008 | 0.273 | -0.326 | -0.028 |
| 11 | -0.078 | 0.279 | 0.116 | -0.461 |
| P-value | Threshold |
|---|---|
| 0.001 | 2.48749 |
| 0.0005 | 3.97392 |
| 0.0001 | 6.76827 |