| Motif | FOSB.H12RSNP.1.M.D |
| Gene (human) | FOSB (GeneCards) |
| Gene synonyms (human) | G0S3 |
| Gene (mouse) | Fosb |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 1 |
| Quality | D |
| Motif | FOSB.H12RSNP.1.M.D |
| Gene (human) | FOSB (GeneCards) |
| Gene synonyms (human) | G0S3 |
| Gene (mouse) | Fosb |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 1 |
| Quality | D |
| Motif length | 11 |
| Consensus | nvhGTCATMvn |
| GC content | 48.65% |
| Information content (bits; total / per base) | 10.156 / 0.923 |
| Data sources | Methyl-HT-SELEX |
| Aligned words | 8359 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 1 (6) | 0.84 | 0.853 | 0.694 | 0.702 | 0.74 | 0.756 | 1.926 | 2.028 | 152.86 | 195.328 |
| Mouse | 4 (27) | 0.71 | 0.745 | 0.539 | 0.593 | 0.622 | 0.658 | 1.419 | 1.565 | 28.538 | 47.046 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Methyl HT-SELEX, 1 experiments | median | 0.937 | 0.91 | 0.861 | 0.831 | 0.734 | 0.73 |
| best | 0.937 | 0.91 | 0.861 | 0.831 | 0.734 | 0.73 | |
| TF superclass | Basic domains {1} (TFClass) |
| TF class | Basic leucine zipper factors (bZIP) {1.1} (TFClass) |
| TF family | Fos-related {1.1.2} (TFClass) |
| TF subfamily | Fos {1.1.2.1} (TFClass) |
| TFClass ID | TFClass: 1.1.2.1.2 |
| HGNC | HGNC:3797 |
| MGI | MGI:95575 |
| EntrezGene (human) | GeneID:2354 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:14282 (SSTAR profile) |
| UniProt ID (human) | FOSB_HUMAN |
| UniProt ID (mouse) | FOSB_MOUSE |
| UniProt AC (human) | P53539 (TFClass) |
| UniProt AC (mouse) | P13346 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 1 human, 4 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 1 |
| PCM | FOSB.H12RSNP.1.M.D.pcm |
| PWM | FOSB.H12RSNP.1.M.D.pwm |
| PFM | FOSB.H12RSNP.1.M.D.pfm |
| Alignment | FOSB.H12RSNP.1.M.D.words.tsv |
| Threshold to P-value map | FOSB.H12RSNP.1.M.D.thr |
| Motif in other formats | |
| JASPAR format | FOSB.H12RSNP.1.M.D_jaspar_format.txt |
| MEME format | FOSB.H12RSNP.1.M.D_meme_format.meme |
| Transfac format | FOSB.H12RSNP.1.M.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 1580.5 | 1888.5 | 2543.5 | 2346.5 |
| 02 | 3077.0 | 1426.0 | 2717.0 | 1139.0 |
| 03 | 1656.0 | 4440.0 | 473.0 | 1790.0 |
| 04 | 521.0 | 284.0 | 7552.0 | 2.0 |
| 05 | 0.0 | 0.0 | 0.0 | 8359.0 |
| 06 | 10.0 | 8349.0 | 0.0 | 0.0 |
| 07 | 8242.0 | 117.0 | 0.0 | 0.0 |
| 08 | 0.0 | 502.0 | 8.0 | 7849.0 |
| 09 | 1546.0 | 5068.0 | 668.0 | 1077.0 |
| 10 | 3402.75 | 1729.75 | 2574.75 | 651.75 |
| 11 | 1638.25 | 2900.25 | 1490.25 | 2330.25 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.189 | 0.226 | 0.304 | 0.281 |
| 02 | 0.368 | 0.171 | 0.325 | 0.136 |
| 03 | 0.198 | 0.531 | 0.057 | 0.214 |
| 04 | 0.062 | 0.034 | 0.903 | 0.0 |
| 05 | 0.0 | 0.0 | 0.0 | 1.0 |
| 06 | 0.001 | 0.999 | 0.0 | 0.0 |
| 07 | 0.986 | 0.014 | 0.0 | 0.0 |
| 08 | 0.0 | 0.06 | 0.001 | 0.939 |
| 09 | 0.185 | 0.606 | 0.08 | 0.129 |
| 10 | 0.407 | 0.207 | 0.308 | 0.078 |
| 11 | 0.196 | 0.347 | 0.178 | 0.279 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.279 | -0.101 | 0.196 | 0.116 |
| 02 | 0.387 | -0.382 | 0.262 | -0.606 |
| 03 | -0.232 | 0.753 | -1.482 | -0.155 |
| 04 | -1.386 | -1.989 | 1.284 | -6.197 |
| 05 | -6.832 | -6.832 | -6.832 | 1.385 |
| 06 | -5.14 | 1.384 | -6.832 | -6.832 |
| 07 | 1.371 | -2.865 | -6.832 | -6.832 |
| 08 | -6.832 | -1.423 | -5.318 | 1.323 |
| 09 | -0.301 | 0.885 | -1.138 | -0.662 |
| 10 | 0.487 | -0.189 | 0.209 | -1.163 |
| 11 | -0.243 | 0.327 | -0.338 | 0.109 |
| P-value | Threshold |
|---|---|
| 0.001 | 4.892665 |
| 0.0005 | 5.968245 |
| 0.0001 | 7.61993 |