MotifFOSB.H12INVIVO.2.M.C
Gene (human)FOSB
(GeneCards)
Gene synonyms (human)G0S3
Gene (mouse)Fosb
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype2
Quality
C
Motif length16
ConsensusndRTKACGTCATCRbn
GC content47.26%
Information content (bits; total / per base)17.359 / 1.085
Data sourcesMethyl-HT-SELEX
Aligned words548

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (6) 0.689 0.695 0.495 0.504 0.523 0.536 1.191 1.225 11.696 14.796
Mouse 4 (27) 0.623 0.666 0.444 0.491 0.499 0.544 1.17 1.274 3.523 6.022

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Methyl HT-SELEX, 1 experiments median 0.916 0.891 0.83 0.801 0.715 0.707
best 0.916 0.891 0.83 0.801 0.715 0.707
TF superclassBasic domains {1} (TFClass)
TF classBasic leucine zipper factors (bZIP) {1.1} (TFClass)
TF familyFos-related {1.1.2} (TFClass)
TF subfamilyFos {1.1.2.1} (TFClass)
TFClass IDTFClass: 1.1.2.1.2
HGNCHGNC:3797
MGIMGI:95575
EntrezGene (human)GeneID:2354
(SSTAR profile)
EntrezGene (mouse)GeneID:14282
(SSTAR profile)
UniProt ID (human)FOSB_HUMAN
UniProt ID (mouse)FOSB_MOUSE
UniProt AC (human)P53539
(TFClass)
UniProt AC (mouse)P13346
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 4 mouse
HT-SELEX 0
Methyl-HT-SELEX 1
PCM
ACGT
01110.0141.0147.0150.0
02110.2588.25224.25125.25
03385.026.0111.026.0
0437.011.024.0476.0
0521.046.0409.072.0
06476.014.057.01.0
074.0489.02.053.0
0811.00.0537.00.0
090.00.00.0548.0
100.0548.00.00.0
11548.00.00.00.0
120.00.00.0548.0
1360.0445.020.023.0
14302.047.0191.08.0
1580.0202.081.0185.0
16113.5163.5119.5151.5
PFM
ACGT
010.2010.2570.2680.274
020.2010.1610.4090.229
030.7030.0470.2030.047
040.0680.020.0440.869
050.0380.0840.7460.131
060.8690.0260.1040.002
070.0070.8920.0040.097
080.020.00.980.0
090.00.00.01.0
100.01.00.00.0
111.00.00.00.0
120.00.00.01.0
130.1090.8120.0360.042
140.5510.0860.3490.015
150.1460.3690.1480.338
160.2070.2980.2180.276
PWM
ACGT
01-0.2170.0280.070.09
02-0.214-0.4340.488-0.089
031.026-1.614-0.208-1.614
04-1.279-2.4-1.691.237
05-1.815-1.0691.086-0.633
061.237-2.186-0.861-3.985
07-3.2131.264-3.657-0.932
08-2.4-4.4761.358-4.476
09-4.476-4.476-4.4761.378
10-4.4761.378-4.476-4.476
111.378-4.476-4.476-4.476
12-4.476-4.476-4.4761.378
13-0.8111.17-1.86-1.73
140.784-1.0480.329-2.672
15-0.530.385-0.5180.297
16-0.1860.175-0.1350.1
Standard thresholds
P-value Threshold
0.001 1.28211
0.0005 2.72556
0.0001 5.72446