MotifFOSB.H12INVITRO.1.M.C
Gene (human)FOSB
(GeneCards)
Gene synonyms (human)G0S3
Gene (mouse)Fosb
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype1
Quality
C
Motif length11
ConsensusnvhGTCATMvn
GC content48.65%
Information content (bits; total / per base)10.156 / 0.923
Data sourcesMethyl-HT-SELEX
Aligned words8359

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (6) 0.84 0.853 0.694 0.702 0.74 0.756 1.926 2.028 152.86 195.328
Mouse 4 (27) 0.71 0.745 0.539 0.593 0.622 0.658 1.419 1.565 28.538 47.046

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Methyl HT-SELEX, 1 experiments median 0.937 0.91 0.861 0.831 0.734 0.73
best 0.937 0.91 0.861 0.831 0.734 0.73
TF superclassBasic domains {1} (TFClass)
TF classBasic leucine zipper factors (bZIP) {1.1} (TFClass)
TF familyFos-related {1.1.2} (TFClass)
TF subfamilyFos {1.1.2.1} (TFClass)
TFClass IDTFClass: 1.1.2.1.2
HGNCHGNC:3797
MGIMGI:95575
EntrezGene (human)GeneID:2354
(SSTAR profile)
EntrezGene (mouse)GeneID:14282
(SSTAR profile)
UniProt ID (human)FOSB_HUMAN
UniProt ID (mouse)FOSB_MOUSE
UniProt AC (human)P53539
(TFClass)
UniProt AC (mouse)P13346
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 4 mouse
HT-SELEX 0
Methyl-HT-SELEX 1
PCM
ACGT
011580.51888.52543.52346.5
023077.01426.02717.01139.0
031656.04440.0473.01790.0
04521.0284.07552.02.0
050.00.00.08359.0
0610.08349.00.00.0
078242.0117.00.00.0
080.0502.08.07849.0
091546.05068.0668.01077.0
103402.751729.752574.75651.75
111638.252900.251490.252330.25
PFM
ACGT
010.1890.2260.3040.281
020.3680.1710.3250.136
030.1980.5310.0570.214
040.0620.0340.9030.0
050.00.00.01.0
060.0010.9990.00.0
070.9860.0140.00.0
080.00.060.0010.939
090.1850.6060.080.129
100.4070.2070.3080.078
110.1960.3470.1780.279
PWM
ACGT
01-0.279-0.1010.1960.116
020.387-0.3820.262-0.606
03-0.2320.753-1.482-0.155
04-1.386-1.9891.284-6.197
05-6.832-6.832-6.8321.385
06-5.141.384-6.832-6.832
071.371-2.865-6.832-6.832
08-6.832-1.423-5.3181.323
09-0.3010.885-1.138-0.662
100.487-0.1890.209-1.163
11-0.2430.327-0.3380.109
Standard thresholds
P-value Threshold
0.001 4.892665
0.0005 5.968245
0.0001 7.61993