MotifFER3L.H12INVIVO.0.SM.D
Gene (human)FERD3L
(GeneCards)
Gene synonyms (human)BHLHA31, NATO3, NTWIST
Gene (mouse)Ferd3l
Gene synonyms (mouse)Nato, Ntwist
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length16
ConsensusnbGTAACAGCTGKYRC
GC content52.7%
Information content (bits; total / per base)20.476 / 1.28
Data sourcesHT-SELEX + Methyl-HT-SELEX
Aligned words9519

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Overall, 2 experiments median 1.0 1.0 1.0 1.0 1.0 1.0
best 1.0 1.0 1.0 1.0 1.0 1.0
Methyl HT-SELEX, 1 experiments median 1.0 1.0 1.0 1.0 1.0 1.0
best 1.0 1.0 1.0 1.0 1.0 1.0
Non-Methyl HT-SELEX, 1 experiments median 1.0 1.0 1.0 1.0 1.0 1.0
best 1.0 1.0 1.0 1.0 1.0 1.0
TF superclassBasic domains {1} (TFClass)
TF classBasic helix-loop-helix factors (bHLH) {1.2} (TFClass)
TF familyTal-related {1.2.3} (TFClass)
TF subfamilyNeurogenin-ATO {1.2.3.4} (TFClass)
TFClass IDTFClass: 1.2.3.4.17
HGNCHGNC:16660
MGIMGI:2150010
EntrezGene (human)GeneID:222894
(SSTAR profile)
EntrezGene (mouse)GeneID:114712
(SSTAR profile)
UniProt ID (human)FER3L_HUMAN
UniProt ID (mouse)FER3L_MOUSE
UniProt AC (human)Q96RJ6
(TFClass)
UniProt AC (mouse)Q923Z4
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 0 mouse
HT-SELEX 1
Methyl-HT-SELEX 1
PCM
ACGT
012486.01831.02714.02488.0
02451.03470.03551.02047.0
0313.01.09498.07.0
0415.01145.010.08349.0
058240.0330.0945.04.0
069404.097.017.01.0
070.09519.00.00.0
089519.00.00.00.0
090.012.08280.01227.0
101372.08108.039.00.0
114.01.00.09514.0
120.00.09515.04.0
13212.0428.02369.06510.0
14106.03134.01708.04571.0
153674.0609.04752.0484.0
16493.07793.0391.0842.0
PFM
ACGT
010.2610.1920.2850.261
020.0470.3650.3730.215
030.0010.00.9980.001
040.0020.120.0010.877
050.8660.0350.0990.0
060.9880.010.0020.0
070.01.00.00.0
081.00.00.00.0
090.00.0010.870.129
100.1440.8520.0040.0
110.00.00.00.999
120.00.01.00.0
130.0220.0450.2490.684
140.0110.3290.1790.48
150.3860.0640.4990.051
160.0520.8190.0410.088
PWM
ACGT
010.044-0.2620.1310.044
02-1.6590.3770.4-0.15
03-5.048-6.5851.383-5.547
04-4.926-0.731-5.2671.254
051.241-1.97-0.922-5.937
061.373-3.178-4.816-6.585
07-6.9471.386-6.947-6.947
081.386-6.947-6.947-6.947
09-6.947-5.1161.246-0.662
10-0.551.225-4.055-6.947
11-5.937-6.585-6.9471.385
12-6.947-6.9471.385-5.937
13-2.408-1.711-0.0051.006
14-3.0910.275-0.3310.652
150.434-1.360.691-1.589
16-1.5711.186-1.801-1.037
Standard thresholds
P-value Threshold
0.001 -4.56609
0.0005 -2.43754
0.0001 2.07616