| Motif | ETV3.H12INVIVO.0.SM.D |
| Gene (human) | ETV3 (GeneCards) |
| Gene synonyms (human) | METS, PE1 |
| Gene (mouse) | Etv3 |
| Gene synonyms (mouse) | Mets, Pe1 |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | ETV3.H12INVIVO.0.SM.D |
| Gene (human) | ETV3 (GeneCards) |
| Gene synonyms (human) | METS, PE1 |
| Gene (mouse) | Etv3 |
| Gene synonyms (mouse) | Mets, Pe1 |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 12 |
| Consensus | nRSMGGAAGTvn |
| GC content | 49.89% |
| Information content (bits; total / per base) | 12.064 / 1.005 |
| Data sources | HT-SELEX + Methyl-HT-SELEX |
| Aligned words | 9493 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Overall, 4 experiments | median | 0.801 | 0.793 | 0.755 | 0.752 | 0.676 | 0.683 |
| best | 0.996 | 0.994 | 0.989 | 0.984 | 0.942 | 0.935 | |
| Methyl HT-SELEX, 1 experiments | median | 0.988 | 0.982 | 0.961 | 0.949 | 0.829 | 0.835 |
| best | 0.988 | 0.982 | 0.961 | 0.949 | 0.829 | 0.835 | |
| Non-Methyl HT-SELEX, 3 experiments | median | 0.614 | 0.605 | 0.55 | 0.555 | 0.523 | 0.531 |
| best | 0.996 | 0.994 | 0.989 | 0.984 | 0.942 | 0.935 | |
| TF superclass | Helix-turn-helix domains {3} (TFClass) |
| TF class | Tryptophan cluster factors {3.5} (TFClass) |
| TF family | Ets-related {3.5.2} (TFClass) |
| TF subfamily | ETS-like {3.5.2.1} (TFClass) |
| TFClass ID | TFClass: 3.5.2.1.9 |
| HGNC | HGNC:3492 |
| MGI | MGI:1350926 |
| EntrezGene (human) | GeneID:2117 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:27049 (SSTAR profile) |
| UniProt ID (human) | ETV3_HUMAN |
| UniProt ID (mouse) | ETV3_MOUSE |
| UniProt AC (human) | P41162 (TFClass) |
| UniProt AC (mouse) | Q8R4Z4 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 0 human, 0 mouse |
| HT-SELEX | 3 |
| Methyl-HT-SELEX | 1 |
| PCM | ETV3.H12INVIVO.0.SM.D.pcm |
| PWM | ETV3.H12INVIVO.0.SM.D.pwm |
| PFM | ETV3.H12INVIVO.0.SM.D.pfm |
| Alignment | ETV3.H12INVIVO.0.SM.D.words.tsv |
| Threshold to P-value map | ETV3.H12INVIVO.0.SM.D.thr |
| Motif in other formats | |
| JASPAR format | ETV3.H12INVIVO.0.SM.D_jaspar_format.txt |
| MEME format | ETV3.H12INVIVO.0.SM.D_meme_format.meme |
| Transfac format | ETV3.H12INVIVO.0.SM.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 3536.0 | 1534.0 | 2310.0 | 2113.0 |
| 02 | 6710.5 | 304.5 | 1403.5 | 1074.5 |
| 03 | 1057.0 | 6125.0 | 1444.0 | 867.0 |
| 04 | 3416.0 | 5998.0 | 64.0 | 15.0 |
| 05 | 0.0 | 0.0 | 9493.0 | 0.0 |
| 06 | 0.0 | 0.0 | 9493.0 | 0.0 |
| 07 | 9492.0 | 0.0 | 0.0 | 1.0 |
| 08 | 8506.0 | 0.0 | 0.0 | 987.0 |
| 09 | 3305.0 | 25.0 | 6160.0 | 3.0 |
| 10 | 85.0 | 1819.0 | 255.0 | 7334.0 |
| 11 | 3121.0 | 1640.0 | 3578.0 | 1154.0 |
| 12 | 2621.5 | 2987.5 | 2195.5 | 1688.5 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.372 | 0.162 | 0.243 | 0.223 |
| 02 | 0.707 | 0.032 | 0.148 | 0.113 |
| 03 | 0.111 | 0.645 | 0.152 | 0.091 |
| 04 | 0.36 | 0.632 | 0.007 | 0.002 |
| 05 | 0.0 | 0.0 | 1.0 | 0.0 |
| 06 | 0.0 | 0.0 | 1.0 | 0.0 |
| 07 | 1.0 | 0.0 | 0.0 | 0.0 |
| 08 | 0.896 | 0.0 | 0.0 | 0.104 |
| 09 | 0.348 | 0.003 | 0.649 | 0.0 |
| 10 | 0.009 | 0.192 | 0.027 | 0.773 |
| 11 | 0.329 | 0.173 | 0.377 | 0.122 |
| 12 | 0.276 | 0.315 | 0.231 | 0.178 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.398 | -0.436 | -0.027 | -0.116 |
| 02 | 1.039 | -2.047 | -0.525 | -0.791 |
| 03 | -0.808 | 0.948 | -0.496 | -1.005 |
| 04 | 0.364 | 0.927 | -3.579 | -4.923 |
| 05 | -6.945 | -6.945 | 1.386 | -6.945 |
| 06 | -6.945 | -6.945 | 1.386 | -6.945 |
| 07 | 1.385 | -6.945 | -6.945 | -6.582 |
| 08 | 1.276 | -6.945 | -6.945 | -0.876 |
| 09 | 0.331 | -4.466 | 0.953 | -6.107 |
| 10 | -3.304 | -0.266 | -2.223 | 1.128 |
| 11 | 0.274 | -0.369 | 0.41 | -0.72 |
| 12 | 0.099 | 0.23 | -0.078 | -0.34 |
| P-value | Threshold |
|---|---|
| 0.001 | 3.52746 |
| 0.0005 | 5.15874 |
| 0.0001 | 7.58231 |