MotifETV3.H12INVIVO.0.SM.D
Gene (human)ETV3
(GeneCards)
Gene synonyms (human)METS, PE1
Gene (mouse)Etv3
Gene synonyms (mouse)Mets, Pe1
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length12
ConsensusnRSMGGAAGTvn
GC content49.89%
Information content (bits; total / per base)12.064 / 1.005
Data sourcesHT-SELEX + Methyl-HT-SELEX
Aligned words9493

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Overall, 4 experiments median 0.801 0.793 0.755 0.752 0.676 0.683
best 0.996 0.994 0.989 0.984 0.942 0.935
Methyl HT-SELEX, 1 experiments median 0.988 0.982 0.961 0.949 0.829 0.835
best 0.988 0.982 0.961 0.949 0.829 0.835
Non-Methyl HT-SELEX, 3 experiments median 0.614 0.605 0.55 0.555 0.523 0.531
best 0.996 0.994 0.989 0.984 0.942 0.935
TF superclassHelix-turn-helix domains {3} (TFClass)
TF classTryptophan cluster factors {3.5} (TFClass)
TF familyEts-related {3.5.2} (TFClass)
TF subfamilyETS-like {3.5.2.1} (TFClass)
TFClass IDTFClass: 3.5.2.1.9
HGNCHGNC:3492
MGIMGI:1350926
EntrezGene (human)GeneID:2117
(SSTAR profile)
EntrezGene (mouse)GeneID:27049
(SSTAR profile)
UniProt ID (human)ETV3_HUMAN
UniProt ID (mouse)ETV3_MOUSE
UniProt AC (human)P41162
(TFClass)
UniProt AC (mouse)Q8R4Z4
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 0 mouse
HT-SELEX 3
Methyl-HT-SELEX 1
PCM
ACGT
013536.01534.02310.02113.0
026710.5304.51403.51074.5
031057.06125.01444.0867.0
043416.05998.064.015.0
050.00.09493.00.0
060.00.09493.00.0
079492.00.00.01.0
088506.00.00.0987.0
093305.025.06160.03.0
1085.01819.0255.07334.0
113121.01640.03578.01154.0
122621.52987.52195.51688.5
PFM
ACGT
010.3720.1620.2430.223
020.7070.0320.1480.113
030.1110.6450.1520.091
040.360.6320.0070.002
050.00.01.00.0
060.00.01.00.0
071.00.00.00.0
080.8960.00.00.104
090.3480.0030.6490.0
100.0090.1920.0270.773
110.3290.1730.3770.122
120.2760.3150.2310.178
PWM
ACGT
010.398-0.436-0.027-0.116
021.039-2.047-0.525-0.791
03-0.8080.948-0.496-1.005
040.3640.927-3.579-4.923
05-6.945-6.9451.386-6.945
06-6.945-6.9451.386-6.945
071.385-6.945-6.945-6.582
081.276-6.945-6.945-0.876
090.331-4.4660.953-6.107
10-3.304-0.266-2.2231.128
110.274-0.3690.41-0.72
120.0990.23-0.078-0.34
Standard thresholds
P-value Threshold
0.001 3.52746
0.0005 5.15874
0.0001 7.58231