MotifETS2.H12INVIVO.0.S.C
Gene (human)ETS2
(GeneCards)
Gene synonyms (human)
Gene (mouse)Ets2
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length19
ConsensusndCCGGAARYvbddvbbnn
GC content57.32%
Information content (bits; total / per base)13.528 / 0.712
Data sourcesHT-SELEX
Aligned words9942

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (11) 0.568 0.584 0.413 0.443 0.537 0.572 1.175 1.378 0 3.745
Mouse 2 (13) 0.775 0.827 0.68 0.721 0.737 0.776 2.414 2.549 54.921 86.367

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Non-Methyl HT-SELEX, 1 experiments median 0.997 0.996 0.952 0.949 0.771 0.799
best 0.997 0.996 0.952 0.949 0.771 0.799

rSNP benchmarking, SNP-SELEX auROC auPRC Pearson r Kendall tau
batch 2 0.741 0.377 0.602 0.299
TF superclassHelix-turn-helix domains {3} (TFClass)
TF classTryptophan cluster factors {3.5} (TFClass)
TF familyEts-related {3.5.2} (TFClass)
TF subfamilyETS-like {3.5.2.1} (TFClass)
TFClass IDTFClass: 3.5.2.1.2
HGNCHGNC:3489
MGIMGI:95456
EntrezGene (human)GeneID:2114
(SSTAR profile)
EntrezGene (mouse)GeneID:23872
(SSTAR profile)
UniProt ID (human)ETS2_HUMAN
UniProt ID (mouse)ETS2_MOUSE
UniProt AC (human)P15036
(TFClass)
UniProt AC (mouse)P15037
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 2 mouse
HT-SELEX 1
Methyl-HT-SELEX 0
PCM
ACGT
012477.752521.752703.752238.75
025568.0672.02178.01524.0
03420.08257.01209.056.0
04653.09200.070.019.0
051.01.09931.09.0
064.00.09934.04.0
079860.018.05.059.0
087674.065.019.02184.0
092736.0139.06999.068.0
10252.03117.0503.06070.0
113145.01459.04335.01003.0
121293.04706.02177.01766.0
133140.01283.02098.03421.0
141607.01324.01602.05409.0
151459.05501.01606.01376.0
161311.05660.01454.01517.0
171413.01598.04647.02284.0
181778.752494.753806.751861.75
192270.52555.52422.52693.5
PFM
ACGT
010.2490.2540.2720.225
020.560.0680.2190.153
030.0420.8310.1220.006
040.0660.9250.0070.002
050.00.00.9990.001
060.00.00.9990.0
070.9920.0020.0010.006
080.7720.0070.0020.22
090.2750.0140.7040.007
100.0250.3140.0510.611
110.3160.1470.4360.101
120.130.4730.2190.178
130.3160.1290.2110.344
140.1620.1330.1610.544
150.1470.5530.1620.138
160.1320.5690.1460.153
170.1420.1610.4670.23
180.1790.2510.3830.187
190.2280.2570.2440.271
PWM
ACGT
01-0.0030.0140.084-0.104
020.806-1.305-0.132-0.489
03-1.7731.2-0.72-3.754
04-1.3341.308-3.538-4.76
05-6.625-6.6251.384-5.394
06-5.978-6.9861.385-5.978
071.377-4.808-5.831-3.703
081.127-3.61-4.76-0.129
090.096-2.8681.035-3.566
10-2.2810.226-1.5940.892
110.235-0.5320.556-0.906
12-0.6530.638-0.132-0.341
130.234-0.66-0.1690.319
14-0.436-0.629-0.4390.777
15-0.5320.794-0.436-0.591
16-0.6390.822-0.535-0.493
17-0.564-0.4410.625-0.084
18-0.3340.0040.426-0.289
19-0.090.028-0.0260.08
Standard thresholds
P-value Threshold
0.001 3.09356
0.0005 4.45236
0.0001 7.07066