MotifEHF.H12RSNP.0.P.D
Gene (human)EHF
(GeneCards)
Gene synonyms (human)ESE3, ESE3B, ESEJ
Gene (mouse)Ehf
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length15
ConsensusvdAbSAGGAAGYdvv
GC content50.26%
Information content (bits; total / per base)13.878 / 0.925
Data sourcesChIP-Seq
Aligned words1007

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 5 (30) 0.943 0.968 0.884 0.927 0.95 0.974 4.354 4.888 319.667 554.638
TF superclassHelix-turn-helix domains {3} (TFClass)
TF classTryptophan cluster factors {3.5} (TFClass)
TF familyEts-related {3.5.2} (TFClass)
TF subfamilyEHF-like {3.5.2.4} (TFClass)
TFClass IDTFClass: 3.5.2.4.1
HGNCHGNC:3246
MGIMGI:1270840
EntrezGene (human)GeneID:26298
(SSTAR profile)
EntrezGene (mouse)GeneID:13661
(SSTAR profile)
UniProt ID (human)EHF_HUMAN
UniProt ID (mouse)EHF_MOUSE
UniProt AC (human)Q9NZC4
(TFClass)
UniProt AC (mouse)O70273
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 5 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01237.0222.0405.0143.0
02457.0161.0171.0218.0
03845.07.011.0144.0
04123.0488.0190.0206.0
05197.0519.0290.01.0
06790.0204.013.00.0
070.01.01006.00.0
080.00.01007.00.0
091005.01.01.00.0
101000.00.00.07.0
11227.012.0768.00.0
1228.0166.042.0771.0
13302.0106.0394.0205.0
14236.0225.0439.0107.0
15158.0359.0384.0106.0
PFM
ACGT
010.2350.220.4020.142
020.4540.160.170.216
030.8390.0070.0110.143
040.1220.4850.1890.205
050.1960.5150.2880.001
060.7850.2030.0130.0
070.00.0010.9990.0
080.00.01.00.0
090.9980.0010.0010.0
100.9930.00.00.007
110.2250.0120.7630.0
120.0280.1650.0420.766
130.30.1050.3910.204
140.2340.2230.4360.106
150.1570.3570.3810.105
PWM
ACGT
01-0.06-0.1250.473-0.56
020.593-0.443-0.384-0.143
031.206-3.369-2.991-0.554
04-0.7090.659-0.279-0.199
05-0.2430.720.141-4.531
061.139-0.209-2.845-4.988
07-4.988-4.5311.38-4.988
08-4.988-4.9881.381-4.988
091.379-4.531-4.531-4.988
101.374-4.988-4.988-3.369
11-0.103-2.9161.111-4.988
12-2.143-0.413-1.7571.115
130.181-0.8560.445-0.204
14-0.064-0.1120.553-0.846
15-0.4620.3530.42-0.856
Standard thresholds
P-value Threshold
0.001 2.76576
0.0005 4.10561
0.0001 7.01671