MotifE2F7.H12RSNP.1.P.D
Gene (human)E2F7
(GeneCards)
Gene synonyms (human)
Gene (mouse)E2f7
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype1
Quality
D
Motif length12
ConsensusnKSGCGGGAARn
GC content62.9%
Information content (bits; total / per base)11.552 / 0.963
Data sourcesChIP-Seq
Aligned words668

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (13) 0.762 0.812 0.719 0.757 0.756 0.819 3.004 3.521 26.319 113.469

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Non-Methyl HT-SELEX, 1 experiments median 1.0 1.0 1.0 1.0 0.999 0.998
best 1.0 1.0 1.0 1.0 0.999 0.998
TF superclassHelix-turn-helix domains {3} (TFClass)
TF classFork head/winged helix factors {3.3} (TFClass)
TF familyE2F {3.3.2} (TFClass)
TF subfamilyE2F {3.3.2.1} (TFClass)
TFClass IDTFClass: 3.3.2.1.7
HGNCHGNC:23820
MGIMGI:1289147
EntrezGene (human)GeneID:144455
(SSTAR profile)
EntrezGene (mouse)GeneID:52679
(SSTAR profile)
UniProt ID (human)E2F7_HUMAN
UniProt ID (mouse)E2F7_MOUSE
UniProt AC (human)Q96AV8
(TFClass)
UniProt AC (mouse)Q6S7F2
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 1
Methyl-HT-SELEX 0
PCM
ACGT
01113.0136.0202.0217.0
0271.048.0173.0376.0
0318.0141.0494.015.0
0410.024.0625.09.0
0553.0590.07.018.0
0629.08.0593.038.0
076.069.0580.013.0
088.033.0622.05.0
09611.08.033.016.0
10527.013.0115.013.0
11391.091.0144.042.0
12254.0128.0165.0121.0
PFM
ACGT
010.1690.2040.3020.325
020.1060.0720.2590.563
030.0270.2110.740.022
040.0150.0360.9360.013
050.0790.8830.010.027
060.0430.0120.8880.057
070.0090.1030.8680.019
080.0120.0490.9310.007
090.9150.0120.0490.024
100.7890.0190.1720.019
110.5850.1360.2160.063
120.380.1920.2470.181
PWM
ACGT
01-0.386-0.2030.1890.26
02-0.842-1.2230.0350.806
03-2.151-0.1671.078-2.317
04-2.674-1.8841.313-2.764
05-1.1271.255-2.973-2.151
06-1.706-2.8631.26-1.448
07-3.096-0.871.238-2.445
08-2.863-1.5831.308-3.237
091.29-2.863-1.583-2.258
101.143-2.445-0.369-2.445
110.845-0.599-0.147-1.352
120.416-0.263-0.012-0.319
Standard thresholds
P-value Threshold
0.001 4.32901
0.0005 5.25419
0.0001 7.17831