MotifE2F2.H12INVITRO.0.S.B
Gene (human)E2F2
(GeneCards)
Gene synonyms (human)
Gene (mouse)E2f2
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length16
ConsensusnvddWTGGCGCSMdhb
GC content61.41%
Information content (bits; total / per base)14.396 / 0.9
Data sourcesHT-SELEX
Aligned words8170

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Non-Methyl HT-SELEX, 2 experiments median 0.792 0.79 0.774 0.772 0.764 0.762
best 0.998 0.997 0.998 0.996 0.995 0.992
TF superclassHelix-turn-helix domains {3} (TFClass)
TF classFork head/winged helix factors {3.3} (TFClass)
TF familyE2F {3.3.2} (TFClass)
TF subfamilyE2F {3.3.2.1} (TFClass)
TFClass IDTFClass: 3.3.2.1.2
HGNCHGNC:3114
MGIMGI:1096341
EntrezGene (human)GeneID:1870
(SSTAR profile)
EntrezGene (mouse)GeneID:242705
(SSTAR profile)
UniProt ID (human)E2F2_HUMAN
UniProt ID (mouse)E2F2_MOUSE
UniProt AC (human)Q14209
(TFClass)
UniProt AC (mouse)P56931
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 0 mouse
HT-SELEX 2
Methyl-HT-SELEX 0
PCM
ACGT
011910.02357.02325.01578.0
022494.01375.03091.01210.0
033171.0746.01274.02979.0
043109.0760.01210.03091.0
052816.0180.01043.04131.0
06138.06.0189.07837.0
070.07.08163.00.0
080.00.08170.00.0
091.08169.00.00.0
100.00.08170.00.0
110.08168.02.00.0
1254.03538.04468.0110.0
132762.03891.043.01474.0
142315.0877.02765.02213.0
152020.03457.0915.01778.0
161505.51507.53405.51751.5
PFM
ACGT
010.2340.2880.2850.193
020.3050.1680.3780.148
030.3880.0910.1560.365
040.3810.0930.1480.378
050.3450.0220.1280.506
060.0170.0010.0230.959
070.00.0010.9990.0
080.00.01.00.0
090.01.00.00.0
100.00.01.00.0
110.01.00.00.0
120.0070.4330.5470.013
130.3380.4760.0050.18
140.2830.1070.3380.271
150.2470.4230.1120.218
160.1840.1850.4170.214
PWM
ACGT
01-0.0670.1430.129-0.258
020.2-0.3950.414-0.523
030.439-1.005-0.4710.377
040.42-0.987-0.5230.414
050.321-2.418-0.6710.704
06-2.68-5.513-2.3691.344
07-6.811-5.3981.385-6.811
08-6.811-6.8111.385-6.811
09-6.4441.385-6.811-6.811
10-6.811-6.8111.385-6.811
11-6.8111.385-6.176-6.811
12-3.5930.5490.782-2.902
130.3010.644-3.811-0.326
140.125-0.8440.3030.08
15-0.0110.526-0.802-0.139
16-0.305-0.3030.511-0.154
Standard thresholds
P-value Threshold
0.001 0.81661
0.0005 2.36726
0.0001 6.39221