MotifDPRX.H12INVIVO.0.SM.D
Gene (human)DPRX
(GeneCards)
Gene synonyms (human)
Gene (mouse)
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length12
ConsensusnvGGATTAdbnn
GC content45.58%
Information content (bits; total / per base)12.753 / 1.063
Data sourcesHT-SELEX + Methyl-HT-SELEX
Aligned words8868

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Overall, 4 experiments median 0.997 0.995 0.993 0.99 0.968 0.962
best 0.998 0.996 0.996 0.993 0.984 0.978
Methyl HT-SELEX, 1 experiments median 0.998 0.996 0.996 0.993 0.984 0.978
best 0.998 0.996 0.996 0.993 0.984 0.978
Non-Methyl HT-SELEX, 3 experiments median 0.997 0.994 0.992 0.988 0.953 0.947
best 0.998 0.996 0.995 0.993 0.983 0.977
TF superclassHelix-turn-helix domains {3} (TFClass)
TF classHomeo domain factors {3.1} (TFClass)
TF familyPaired-related HD {3.1.3} (TFClass)
TF subfamilyDPRX {3.1.3.5} (TFClass)
TFClass IDTFClass: 3.1.3.5.1
HGNCHGNC:32166
MGI
EntrezGene (human)GeneID:503834
(SSTAR profile)
EntrezGene (mouse)
UniProt ID (human)DPRX_HUMAN
UniProt ID (mouse)
UniProt AC (human)A6NFQ7
(TFClass)
UniProt AC (mouse)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 0 mouse
HT-SELEX 3
Methyl-HT-SELEX 1
PCM
ACGT
012564.02097.02602.01605.0
021639.03421.02458.01350.0
032.00.08866.00.0
040.00.08868.00.0
058868.00.00.00.0
060.00.00.08868.0
070.00.00.08868.0
088868.00.00.00.0
092879.0464.02761.02764.0
10559.04939.01729.01641.0
111705.53330.52080.51751.5
121916.52459.52432.52059.5
PFM
ACGT
010.2890.2360.2930.181
020.1850.3860.2770.152
030.00.01.00.0
040.00.01.00.0
051.00.00.00.0
060.00.00.01.0
070.00.00.01.0
081.00.00.00.0
090.3250.0520.3110.312
100.0630.5570.1950.185
110.1920.3760.2350.198
120.2160.2770.2740.232
PWM
ACGT
010.145-0.0560.16-0.323
02-0.3020.4330.103-0.495
03-6.253-6.8841.385-6.884
04-6.884-6.8841.386-6.884
051.386-6.884-6.884-6.884
06-6.884-6.884-6.8841.386
07-6.884-6.884-6.8841.386
081.386-6.884-6.884-6.884
090.261-1.560.2190.22
10-1.3750.8-0.248-0.3
11-0.2620.407-0.063-0.235
12-0.1450.1040.093-0.074
Standard thresholds
P-value Threshold
0.001 0.615265
0.0005 1.25032
0.0001 8.02542