MotifDPF1.H12INVIVO.0.SM.D
Gene (human)DPF1
(GeneCards)
Gene synonyms (human)BAF45B, NEUD4
Gene (mouse)Dpf1
Gene synonyms (mouse)Baf45b, Neud4
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length14
ConsensusndbMMCCTATAKvn
GC content46.87%
Information content (bits; total / per base)13.91 / 0.994
Data sourcesHT-SELEX + Methyl-HT-SELEX
Aligned words9954

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Overall, 2 experiments median 0.946 0.936 0.768 0.779 0.635 0.666
best 0.96 0.949 0.798 0.803 0.654 0.683
Methyl HT-SELEX, 1 experiments median 0.932 0.924 0.738 0.755 0.616 0.649
best 0.932 0.924 0.738 0.755 0.616 0.649
Non-Methyl HT-SELEX, 1 experiments median 0.96 0.949 0.798 0.803 0.654 0.683
best 0.96 0.949 0.798 0.803 0.654 0.683
TF superclassYet undefined DNA-binding domains {0} (TFClass)
TF classUncharacterized {0.0} (TFClass)
TF familyUnannotated {0.0.9} (TFClass)
TF subfamily {0.0.9.0} (TFClass)
TFClass IDTFClass: 0.0.9.0.7
HGNCHGNC:20225
MGIMGI:1352748
EntrezGene (human)GeneID:8193
(SSTAR profile)
EntrezGene (mouse)GeneID:29861
(SSTAR profile)
UniProt ID (human)DPF1_HUMAN
UniProt ID (mouse)DPF1_MOUSE
UniProt AC (human)Q92782
(TFClass)
UniProt AC (mouse)Q9QX66
(TFClass)
GRECO-DB-TF
no
ChIP-Seq 0 human, 0 mouse
HT-SELEX 1
Methyl-HT-SELEX 1
PCM
ACGT
012075.752697.752475.752704.75
022327.251275.253899.252452.25
031117.01137.03967.03733.0
041415.07305.0301.0933.0
054952.02751.02182.069.0
0611.09917.09.017.0
07195.09421.0304.034.0
080.00.00.09954.0
099921.031.02.00.0
107.034.00.09913.0
119185.033.0734.02.0
1230.0863.07103.01958.0
134917.252562.252076.25398.25
142898.52049.52192.52813.5
PFM
ACGT
010.2090.2710.2490.272
020.2340.1280.3920.246
030.1120.1140.3990.375
040.1420.7340.030.094
050.4970.2760.2190.007
060.0010.9960.0010.002
070.020.9460.0310.003
080.00.00.01.0
090.9970.0030.00.0
100.0010.0030.00.996
110.9230.0030.0740.0
120.0030.0870.7140.197
130.4940.2570.2090.04
140.2910.2060.220.283
PWM
ACGT
01-0.1810.081-0.0050.083
02-0.067-0.6680.449-0.015
03-0.8-0.7820.4660.405
04-0.5641.076-2.106-0.979
050.6880.1-0.131-3.553
06-5.2321.382-5.395-4.86
07-2.5361.331-2.096-4.229
08-6.987-6.987-6.9871.386
091.382-4.315-6.361-6.987
10-5.59-4.229-6.9871.381
111.305-4.256-1.219-6.361
12-4.345-1.0571.048-0.24
130.6810.029-0.181-1.828
140.152-0.194-0.1270.123
Standard thresholds
P-value Threshold
0.001 2.18071
0.0005 3.70146
0.0001 6.89331