MotifDLX3.H12INVIVO.0.SM.D
Gene (human)DLX3
(GeneCards)
Gene synonyms (human)
Gene (mouse)Dlx3
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length13
ConsensusnSvTAATTACvbn
GC content38.18%
Information content (bits; total / per base)13.987 / 1.076
Data sourcesHT-SELEX + Methyl-HT-SELEX
Aligned words5872

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Overall, 6 experiments median 0.981 0.968 0.972 0.954 0.935 0.915
best 0.99 0.983 0.984 0.974 0.963 0.95
Methyl HT-SELEX, 2 experiments median 0.98 0.966 0.972 0.954 0.935 0.915
best 0.982 0.97 0.973 0.955 0.954 0.932
Non-Methyl HT-SELEX, 4 experiments median 0.983 0.97 0.975 0.959 0.931 0.914
best 0.99 0.983 0.984 0.974 0.963 0.95
TF superclassHelix-turn-helix domains {3} (TFClass)
TF classHomeo domain factors {3.1} (TFClass)
TF familyNK-related {3.1.2} (TFClass)
TF subfamilyDLX {3.1.2.5} (TFClass)
TFClass IDTFClass: 3.1.2.5.3
HGNCHGNC:2916
MGIMGI:94903
EntrezGene (human)GeneID:1747
(SSTAR profile)
EntrezGene (mouse)GeneID:13393
(SSTAR profile)
UniProt ID (human)DLX3_HUMAN
UniProt ID (mouse)DLX3_MOUSE
UniProt AC (human)O60479
(TFClass)
UniProt AC (mouse)Q64205
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 0 mouse
HT-SELEX 4
Methyl-HT-SELEX 2
PCM
ACGT
011496.52185.51105.51084.5
02803.751731.753208.75127.75
031750.02316.0978.0828.0
040.00.00.05872.0
055872.00.00.00.0
065872.00.00.00.0
070.00.00.05872.0
080.00.00.05872.0
095078.00.0794.00.0
100.05309.0563.00.0
111023.01917.02066.0866.0
12427.752586.751504.751352.75
131207.251749.251127.251788.25
PFM
ACGT
010.2550.3720.1880.185
020.1370.2950.5460.022
030.2980.3940.1670.141
040.00.00.01.0
051.00.00.00.0
061.00.00.00.0
070.00.00.01.0
080.00.00.01.0
090.8650.00.1350.0
100.00.9040.0960.0
110.1740.3260.3520.147
120.0730.4410.2560.23
130.2060.2980.1920.305
PWM
ACGT
010.0190.397-0.283-0.302
02-0.6010.1650.781-2.426
030.1750.455-0.405-0.572
04-6.519-6.519-6.5191.385
051.385-6.519-6.519-6.519
061.385-6.519-6.519-6.519
07-6.519-6.519-6.5191.385
08-6.519-6.519-6.5191.385
091.24-6.519-0.613-6.519
10-6.5191.284-0.956-6.519
11-0.3610.2670.341-0.527
12-1.230.5660.025-0.082
13-0.1950.175-0.2640.197
Standard thresholds
P-value Threshold
0.001 0.716115
0.0005 1.9263
0.0001 7.05019