MotifDDIT3.H12INVITRO.0.P.D
Gene (human)DDIT3
(GeneCards)
Gene synonyms (human)CHOP, CHOP10, GADD153
Gene (mouse)Ddit3
Gene synonyms (mouse)Chop, Chop10, Gadd153
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length11
ConsensusnhdvTGCAAYv
GC content41.29%
Information content (bits; total / per base)9.451 / 0.859
Data sourcesChIP-Seq
Aligned words932

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (7) 0.857 0.865 0.764 0.776 0.779 0.79 2.444 2.513 389.222 397.886
Mouse 1 (5) 0.875 0.882 0.804 0.812 0.766 0.773 2.377 2.424 333.456 346.699
TF superclassBasic domains {1} (TFClass)
TF classBasic leucine zipper factors (bZIP) {1.1} (TFClass)
TF familyC/EBP-related {1.1.8} (TFClass)
TF subfamilyCEBP {1.1.8.1} (TFClass)
TFClass IDTFClass: 1.1.8.1.6
HGNCHGNC:2726
MGIMGI:109247
EntrezGene (human)GeneID:1649
(SSTAR profile)
EntrezGene (mouse)GeneID:13198
(SSTAR profile)
UniProt ID (human)DDIT3_HUMAN
UniProt ID (mouse)DDIT3_MOUSE
UniProt AC (human)P35638
(TFClass)
UniProt AC (mouse)P35639
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 1 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01307.0285.0219.0121.0
02158.0116.0107.0551.0
03165.0138.0442.0187.0
04441.0187.0174.0130.0
0569.044.039.0780.0
060.01.0930.01.0
07145.0735.00.052.0
08902.026.02.02.0
09924.02.05.01.0
1023.0189.094.0626.0
11290.0348.0150.0144.0
PFM
ACGT
010.3290.3060.2350.13
020.170.1240.1150.591
030.1770.1480.4740.201
040.4730.2010.1870.139
050.0740.0470.0420.837
060.00.0010.9980.001
070.1560.7890.00.056
080.9680.0280.0020.002
090.9910.0020.0050.001
100.0250.2030.1010.672
110.3110.3730.1610.155
PWM
ACGT
010.2740.2-0.062-0.649
02-0.385-0.69-0.770.856
03-0.342-0.5190.637-0.218
040.635-0.218-0.29-0.578
05-1.2-1.636-1.7521.203
06-4.922-4.4621.379-4.462
07-0.471.144-4.922-1.475
081.348-2.137-4.147-4.147
091.372-4.147-3.555-4.462
10-2.251-0.208-0.8970.984
110.2170.399-0.436-0.477
Standard thresholds
P-value Threshold
0.001 5.02886
0.0005 5.85099
0.0001 7.374955