MotifCR3L4.H12INVIVO.0.M.D
Gene (human)CREB3L4
(GeneCards)
Gene synonyms (human)AIBZIP, CREB4, JAL
Gene (mouse)Creb3l4
Gene synonyms (mouse)Atce1, Jal, Tisp40
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length13
ConsensusSRTGACGTGGMvn
GC content62.19%
Information content (bits; total / per base)14.645 / 1.127
Data sourcesMethyl-HT-SELEX
Aligned words2500

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Overall, 2 experiments median 0.99 0.985 0.973 0.963 0.919 0.906
best 0.998 0.996 0.99 0.987 0.948 0.94
Methyl HT-SELEX, 1 experiments median 0.998 0.996 0.99 0.987 0.948 0.94
best 0.998 0.996 0.99 0.987 0.948 0.94
Non-Methyl HT-SELEX, 1 experiments median 0.982 0.973 0.956 0.939 0.891 0.871
best 0.982 0.973 0.956 0.939 0.891 0.871
TF superclassBasic domains {1} (TFClass)
TF classBasic leucine zipper factors (bZIP) {1.1} (TFClass)
TF familyCREB-related {1.1.7} (TFClass)
TF subfamilyCREB3-like {1.1.7.2} (TFClass)
TFClass IDTFClass: 1.1.7.2.5
HGNCHGNC:18854
MGIMGI:1916603
EntrezGene (human)GeneID:148327
(SSTAR profile)
EntrezGene (mouse)GeneID:78284
(SSTAR profile)
UniProt ID (human)CR3L4_HUMAN
UniProt ID (mouse)CR3L4_MOUSE
UniProt AC (human)Q8TEY5
(TFClass)
UniProt AC (mouse)Q9D2A5
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 0 mouse
HT-SELEX 1
Methyl-HT-SELEX 1
PCM
ACGT
01265.0376.01518.0341.0
02876.25251.251245.25127.25
0367.0291.071.02071.0
0428.0342.02073.057.0
052462.00.038.00.0
060.02395.024.081.0
075.00.02494.01.0
080.010.00.02490.0
095.0161.02323.011.0
10201.014.02127.0158.0
11493.01826.035.0146.0
121059.75323.75887.75228.75
13553.75576.75807.75561.75
PFM
ACGT
010.1060.150.6070.136
020.3510.1010.4980.051
030.0270.1160.0280.828
040.0110.1370.8290.023
050.9850.00.0150.0
060.00.9580.010.032
070.0020.00.9980.0
080.00.0040.00.996
090.0020.0640.9290.004
100.080.0060.8510.063
110.1970.730.0140.058
120.4240.130.3550.092
130.2220.2310.3230.225
PWM
ACGT
01-0.854-0.5060.886-0.603
020.337-0.9070.688-1.579
03-2.207-0.761-2.1511.196
04-3.041-0.61.197-2.364
051.369-5.77-2.753-5.77
06-5.771.341-3.184-2.023
07-4.501-5.771.382-5.357
08-5.77-3.96-5.771.38
09-4.501-1.3471.311-3.879
10-1.128-3.6711.223-1.366
11-0.2361.07-2.831-1.444
120.527-0.6550.35-1.0
13-0.121-0.080.256-0.106
Standard thresholds
P-value Threshold
0.001 2.61261
0.0005 3.94346
0.0001 6.63777