MotifCR3L1.H12INVIVO.0.PSM.A
Gene (human)CREB3L1
(GeneCards)
Gene synonyms (human)OASIS
Gene (mouse)Creb3l1
Gene synonyms (mouse)Oasis
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
A
Motif length14
ConsensusndnhbACGTGGCdn
GC content59.17%
Information content (bits; total / per base)13.817 / 0.987
Data sourcesChIP-Seq + HT-SELEX + Methyl-HT-SELEX
Aligned words9283

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (7) 0.756 0.79 0.686 0.726 0.707 0.749 2.429 2.715 68.469 103.585

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Overall, 9 experiments median 0.997 0.995 0.968 0.959 0.911 0.897
best 1.0 0.999 0.999 0.999 0.992 0.991
Methyl HT-SELEX, 2 experiments median 0.996 0.994 0.982 0.977 0.941 0.931
best 0.999 0.997 0.996 0.994 0.971 0.966
Non-Methyl HT-SELEX, 7 experiments median 0.997 0.995 0.922 0.922 0.753 0.777
best 1.0 0.999 0.999 0.999 0.992 0.991
TF superclassBasic domains {1} (TFClass)
TF classBasic leucine zipper factors (bZIP) {1.1} (TFClass)
TF familyCREB-related {1.1.7} (TFClass)
TF subfamilyCREB3-like {1.1.7.2} (TFClass)
TFClass IDTFClass: 1.1.7.2.2
HGNCHGNC:18856
MGIMGI:1347062
EntrezGene (human)GeneID:90993
(SSTAR profile)
EntrezGene (mouse)GeneID:26427
(SSTAR profile)
UniProt ID (human)CR3L1_HUMAN
UniProt ID (mouse)CR3L1_MOUSE
UniProt AC (human)Q96BA8
(TFClass)
UniProt AC (mouse)Q9Z125
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 7
Methyl-HT-SELEX 2
PCM
ACGT
012279.251833.252208.252962.25
021696.51243.54377.51965.5
032190.01660.03264.02169.0
042941.03133.0825.02384.0
05981.04000.01904.02398.0
068989.013.0161.0120.0
072.09262.06.013.0
080.00.09281.02.0
092.00.00.09281.0
105.01.09277.00.0
1114.077.08817.0375.0
12429.08529.0116.0209.0
135390.75964.751679.751247.75
141829.02436.01829.03189.0
PFM
ACGT
010.2460.1970.2380.319
020.1830.1340.4720.212
030.2360.1790.3520.234
040.3170.3370.0890.257
050.1060.4310.2050.258
060.9680.0010.0170.013
070.00.9980.0010.001
080.00.01.00.0
090.00.00.01.0
100.0010.00.9990.0
110.0020.0080.950.04
120.0460.9190.0120.023
130.5810.1040.1810.134
140.1970.2620.1970.344
PWM
ACGT
01-0.018-0.236-0.050.244
02-0.313-0.6230.634-0.166
03-0.058-0.3350.341-0.068
040.2370.3-1.0320.027
05-0.860.544-0.1980.033
061.353-5.024-2.655-2.944
07-6.2961.383-5.636-5.024
08-6.925-6.9251.385-6.296
09-6.296-6.925-6.9251.385
10-5.765-6.5621.385-6.925
11-4.96-3.3781.334-1.818
12-1.6841.301-2.978-2.397
130.842-0.876-0.323-0.62
14-0.2380.048-0.2380.318
Standard thresholds
P-value Threshold
0.001 2.00426
0.0005 3.63491
0.0001 6.71441