| Motif | COE3.H12INVIVO.0.P.B |
| Gene (human) | EBF3 (GeneCards) |
| Gene synonyms (human) | COE3 |
| Gene (mouse) | Ebf3 |
| Gene synonyms (mouse) | Coe3 |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | B |
| Motif | COE3.H12INVIVO.0.P.B |
| Gene (human) | EBF3 (GeneCards) |
| Gene synonyms (human) | COE3 |
| Gene (mouse) | Ebf3 |
| Gene synonyms (mouse) | Coe3 |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | B |
| Motif length | 13 |
| Consensus | dnYCCCMWGGGRv |
| GC content | 62.94% |
| Information content (bits; total / per base) | 12.871 / 0.99 |
| Data sources | ChIP-Seq |
| Aligned words | 1000 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 2 (10) | 0.774 | 0.941 | 0.741 | 0.896 | 0.707 | 0.917 | 2.938 | 3.832 | 154.226 | 371.886 |
| TF superclass | Immunoglobulin fold {6} (TFClass) |
| TF class | Rel homology region (RHR) factors {6.1} (TFClass) |
| TF family | EBF-related {6.1.5} (TFClass) |
| TF subfamily | {6.1.5.0} (TFClass) |
| TFClass ID | TFClass: 6.1.5.0.3 |
| HGNC | HGNC:19087 |
| MGI | MGI:894289 |
| EntrezGene (human) | GeneID:253738 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:13593 (SSTAR profile) |
| UniProt ID (human) | COE3_HUMAN |
| UniProt ID (mouse) | COE3_MOUSE |
| UniProt AC (human) | Q9H4W6 (TFClass) |
| UniProt AC (mouse) | O08791 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 2 human, 0 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | COE3.H12INVIVO.0.P.B.pcm |
| PWM | COE3.H12INVIVO.0.P.B.pwm |
| PFM | COE3.H12INVIVO.0.P.B.pfm |
| Alignment | COE3.H12INVIVO.0.P.B.words.tsv |
| Threshold to P-value map | COE3.H12INVIVO.0.P.B.thr |
| Motif in other formats | |
| JASPAR format | COE3.H12INVIVO.0.P.B_jaspar_format.txt |
| MEME format | COE3.H12INVIVO.0.P.B_meme_format.meme |
| Transfac format | COE3.H12INVIVO.0.P.B_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 401.0 | 119.0 | 234.0 | 246.0 |
| 02 | 132.0 | 243.0 | 296.0 | 329.0 |
| 03 | 40.0 | 197.0 | 46.0 | 717.0 |
| 04 | 2.0 | 995.0 | 3.0 | 0.0 |
| 05 | 15.0 | 800.0 | 1.0 | 184.0 |
| 06 | 28.0 | 932.0 | 0.0 | 40.0 |
| 07 | 242.0 | 675.0 | 25.0 | 58.0 |
| 08 | 661.0 | 15.0 | 13.0 | 311.0 |
| 09 | 29.0 | 8.0 | 956.0 | 7.0 |
| 10 | 230.0 | 1.0 | 737.0 | 32.0 |
| 11 | 2.0 | 10.0 | 987.0 | 1.0 |
| 12 | 712.0 | 52.0 | 205.0 | 31.0 |
| 13 | 248.0 | 386.0 | 246.0 | 120.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.401 | 0.119 | 0.234 | 0.246 |
| 02 | 0.132 | 0.243 | 0.296 | 0.329 |
| 03 | 0.04 | 0.197 | 0.046 | 0.717 |
| 04 | 0.002 | 0.995 | 0.003 | 0.0 |
| 05 | 0.015 | 0.8 | 0.001 | 0.184 |
| 06 | 0.028 | 0.932 | 0.0 | 0.04 |
| 07 | 0.242 | 0.675 | 0.025 | 0.058 |
| 08 | 0.661 | 0.015 | 0.013 | 0.311 |
| 09 | 0.029 | 0.008 | 0.956 | 0.007 |
| 10 | 0.23 | 0.001 | 0.737 | 0.032 |
| 11 | 0.002 | 0.01 | 0.987 | 0.001 |
| 12 | 0.712 | 0.052 | 0.205 | 0.031 |
| 13 | 0.248 | 0.386 | 0.246 | 0.12 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.47 | -0.735 | -0.066 | -0.016 |
| 02 | -0.633 | -0.028 | 0.168 | 0.273 |
| 03 | -1.797 | -0.236 | -1.663 | 1.049 |
| 04 | -4.213 | 1.376 | -3.975 | -4.982 |
| 05 | -2.711 | 1.158 | -4.525 | -0.304 |
| 06 | -2.136 | 1.311 | -4.982 | -1.797 |
| 07 | -0.032 | 0.989 | -2.243 | -1.439 |
| 08 | 0.968 | -2.711 | -2.839 | 0.217 |
| 09 | -2.103 | -3.253 | 1.336 | -3.362 |
| 10 | -0.083 | -4.525 | 1.077 | -2.01 |
| 11 | -4.213 | -3.066 | 1.368 | -4.525 |
| 12 | 1.042 | -1.544 | -0.197 | -2.04 |
| 13 | -0.008 | 0.432 | -0.016 | -0.727 |
| P-value | Threshold |
|---|---|
| 0.001 | 3.72361 |
| 0.0005 | 4.84331 |
| 0.0001 | 7.14298 |