MotifCOE3.H12INVITRO.0.P.D
Gene (human)EBF3
(GeneCards)
Gene synonyms (human)COE3
Gene (mouse)Ebf3
Gene synonyms (mouse)Coe3
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length13
ConsensusdnYCCCMWGGGRv
GC content62.94%
Information content (bits; total / per base)12.871 / 0.99
Data sourcesChIP-Seq
Aligned words1000

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 2 (10) 0.774 0.941 0.741 0.896 0.707 0.917 2.938 3.832 154.226 371.886
TF superclassImmunoglobulin fold {6} (TFClass)
TF classRel homology region (RHR) factors {6.1} (TFClass)
TF familyEBF-related {6.1.5} (TFClass)
TF subfamily {6.1.5.0} (TFClass)
TFClass IDTFClass: 6.1.5.0.3
HGNCHGNC:19087
MGIMGI:894289
EntrezGene (human)GeneID:253738
(SSTAR profile)
EntrezGene (mouse)GeneID:13593
(SSTAR profile)
UniProt ID (human)COE3_HUMAN
UniProt ID (mouse)COE3_MOUSE
UniProt AC (human)Q9H4W6
(TFClass)
UniProt AC (mouse)O08791
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 2 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01401.0119.0234.0246.0
02132.0243.0296.0329.0
0340.0197.046.0717.0
042.0995.03.00.0
0515.0800.01.0184.0
0628.0932.00.040.0
07242.0675.025.058.0
08661.015.013.0311.0
0929.08.0956.07.0
10230.01.0737.032.0
112.010.0987.01.0
12712.052.0205.031.0
13248.0386.0246.0120.0
PFM
ACGT
010.4010.1190.2340.246
020.1320.2430.2960.329
030.040.1970.0460.717
040.0020.9950.0030.0
050.0150.80.0010.184
060.0280.9320.00.04
070.2420.6750.0250.058
080.6610.0150.0130.311
090.0290.0080.9560.007
100.230.0010.7370.032
110.0020.010.9870.001
120.7120.0520.2050.031
130.2480.3860.2460.12
PWM
ACGT
010.47-0.735-0.066-0.016
02-0.633-0.0280.1680.273
03-1.797-0.236-1.6631.049
04-4.2131.376-3.975-4.982
05-2.7111.158-4.525-0.304
06-2.1361.311-4.982-1.797
07-0.0320.989-2.243-1.439
080.968-2.711-2.8390.217
09-2.103-3.2531.336-3.362
10-0.083-4.5251.077-2.01
11-4.213-3.0661.368-4.525
121.042-1.544-0.197-2.04
13-0.0080.432-0.016-0.727
Standard thresholds
P-value Threshold
0.001 3.72361
0.0005 4.84331
0.0001 7.14298