MotifCOE2.H12RSNP.0.P.D
Gene (human)EBF2
(GeneCards)
Gene synonyms (human)COE2
Gene (mouse)Ebf2
Gene synonyms (mouse)Coe2, Mmot1
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length14
ConsensusddbTCCChdGRGRv
GC content61.3%
Information content (bits; total / per base)13.129 / 0.938
Data sourcesChIP-Seq
Aligned words1000

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Mouse 9 (55) 0.941 0.97 0.874 0.932 0.901 0.943 3.316 3.848 416.398 611.796
TF superclassImmunoglobulin fold {6} (TFClass)
TF classRel homology region (RHR) factors {6.1} (TFClass)
TF familyEBF-related {6.1.5} (TFClass)
TF subfamily {6.1.5.0} (TFClass)
TFClass IDTFClass: 6.1.5.0.2
HGNCHGNC:19090
MGIMGI:894332
EntrezGene (human)GeneID:64641
(SSTAR profile)
EntrezGene (mouse)GeneID:13592
(SSTAR profile)
UniProt ID (human)COE2_HUMAN
UniProt ID (mouse)COE2_MOUSE
UniProt AC (human)Q9HAK2
(TFClass)
UniProt AC (mouse)O08792
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 9 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01421.0151.0208.0220.0
02400.081.0285.0234.0
03139.0171.0338.0352.0
049.036.012.0943.0
053.0994.01.02.0
060.0989.00.011.0
072.0998.00.00.0
08280.0366.016.0338.0
09436.054.0306.0204.0
10102.04.0870.024.0
11375.01.0600.024.0
120.06.0989.05.0
13492.059.0363.086.0
14233.0402.0282.083.0
PFM
ACGT
010.4210.1510.2080.22
020.40.0810.2850.234
030.1390.1710.3380.352
040.0090.0360.0120.943
050.0030.9940.0010.002
060.00.9890.00.011
070.0020.9980.00.0
080.280.3660.0160.338
090.4360.0540.3060.204
100.1020.0040.870.024
110.3750.0010.60.024
120.00.0060.9890.005
130.4920.0590.3630.086
140.2330.4020.2820.083
PWM
ACGT
010.518-0.5-0.183-0.127
020.467-1.1130.13-0.066
03-0.582-0.3770.30.34
04-3.156-1.898-2.9091.323
05-3.9751.375-4.525-4.213
06-4.9821.37-4.982-2.985
07-4.2131.379-4.982-4.982
080.1130.379-2.6530.3
090.553-1.5080.201-0.202
10-0.887-3.7831.242-2.281
110.403-4.5250.871-2.281
12-4.982-3.4841.37-3.622
130.674-1.4220.371-1.054
14-0.070.4720.12-1.089
Standard thresholds
P-value Threshold
0.001 3.33586
0.0005 4.54746
0.0001 7.11551