| Motif | COE2.H12INVITRO.0.P.D |
| Gene (human) | EBF2 (GeneCards) |
| Gene synonyms (human) | COE2 |
| Gene (mouse) | Ebf2 |
| Gene synonyms (mouse) | Coe2, Mmot1 |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | D |
| Motif | COE2.H12INVITRO.0.P.D |
| Gene (human) | EBF2 (GeneCards) |
| Gene synonyms (human) | COE2 |
| Gene (mouse) | Ebf2 |
| Gene synonyms (mouse) | Coe2, Mmot1 |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | D |
| Motif length | 14 |
| Consensus | ddbTCCChdGRGRv |
| GC content | 61.3% |
| Information content (bits; total / per base) | 13.129 / 0.938 |
| Data sources | ChIP-Seq |
| Aligned words | 1000 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Mouse | 9 (55) | 0.941 | 0.97 | 0.874 | 0.932 | 0.901 | 0.943 | 3.316 | 3.848 | 416.398 | 611.796 |
| TF superclass | Immunoglobulin fold {6} (TFClass) |
| TF class | Rel homology region (RHR) factors {6.1} (TFClass) |
| TF family | EBF-related {6.1.5} (TFClass) |
| TF subfamily | {6.1.5.0} (TFClass) |
| TFClass ID | TFClass: 6.1.5.0.2 |
| HGNC | HGNC:19090 |
| MGI | MGI:894332 |
| EntrezGene (human) | GeneID:64641 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:13592 (SSTAR profile) |
| UniProt ID (human) | COE2_HUMAN |
| UniProt ID (mouse) | COE2_MOUSE |
| UniProt AC (human) | Q9HAK2 (TFClass) |
| UniProt AC (mouse) | O08792 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 0 human, 9 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | COE2.H12INVITRO.0.P.D.pcm |
| PWM | COE2.H12INVITRO.0.P.D.pwm |
| PFM | COE2.H12INVITRO.0.P.D.pfm |
| Alignment | COE2.H12INVITRO.0.P.D.words.tsv |
| Threshold to P-value map | COE2.H12INVITRO.0.P.D.thr |
| Motif in other formats | |
| JASPAR format | COE2.H12INVITRO.0.P.D_jaspar_format.txt |
| MEME format | COE2.H12INVITRO.0.P.D_meme_format.meme |
| Transfac format | COE2.H12INVITRO.0.P.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 421.0 | 151.0 | 208.0 | 220.0 |
| 02 | 400.0 | 81.0 | 285.0 | 234.0 |
| 03 | 139.0 | 171.0 | 338.0 | 352.0 |
| 04 | 9.0 | 36.0 | 12.0 | 943.0 |
| 05 | 3.0 | 994.0 | 1.0 | 2.0 |
| 06 | 0.0 | 989.0 | 0.0 | 11.0 |
| 07 | 2.0 | 998.0 | 0.0 | 0.0 |
| 08 | 280.0 | 366.0 | 16.0 | 338.0 |
| 09 | 436.0 | 54.0 | 306.0 | 204.0 |
| 10 | 102.0 | 4.0 | 870.0 | 24.0 |
| 11 | 375.0 | 1.0 | 600.0 | 24.0 |
| 12 | 0.0 | 6.0 | 989.0 | 5.0 |
| 13 | 492.0 | 59.0 | 363.0 | 86.0 |
| 14 | 233.0 | 402.0 | 282.0 | 83.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.421 | 0.151 | 0.208 | 0.22 |
| 02 | 0.4 | 0.081 | 0.285 | 0.234 |
| 03 | 0.139 | 0.171 | 0.338 | 0.352 |
| 04 | 0.009 | 0.036 | 0.012 | 0.943 |
| 05 | 0.003 | 0.994 | 0.001 | 0.002 |
| 06 | 0.0 | 0.989 | 0.0 | 0.011 |
| 07 | 0.002 | 0.998 | 0.0 | 0.0 |
| 08 | 0.28 | 0.366 | 0.016 | 0.338 |
| 09 | 0.436 | 0.054 | 0.306 | 0.204 |
| 10 | 0.102 | 0.004 | 0.87 | 0.024 |
| 11 | 0.375 | 0.001 | 0.6 | 0.024 |
| 12 | 0.0 | 0.006 | 0.989 | 0.005 |
| 13 | 0.492 | 0.059 | 0.363 | 0.086 |
| 14 | 0.233 | 0.402 | 0.282 | 0.083 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.518 | -0.5 | -0.183 | -0.127 |
| 02 | 0.467 | -1.113 | 0.13 | -0.066 |
| 03 | -0.582 | -0.377 | 0.3 | 0.34 |
| 04 | -3.156 | -1.898 | -2.909 | 1.323 |
| 05 | -3.975 | 1.375 | -4.525 | -4.213 |
| 06 | -4.982 | 1.37 | -4.982 | -2.985 |
| 07 | -4.213 | 1.379 | -4.982 | -4.982 |
| 08 | 0.113 | 0.379 | -2.653 | 0.3 |
| 09 | 0.553 | -1.508 | 0.201 | -0.202 |
| 10 | -0.887 | -3.783 | 1.242 | -2.281 |
| 11 | 0.403 | -4.525 | 0.871 | -2.281 |
| 12 | -4.982 | -3.484 | 1.37 | -3.622 |
| 13 | 0.674 | -1.422 | 0.371 | -1.054 |
| 14 | -0.07 | 0.472 | 0.12 | -1.089 |
| P-value | Threshold |
|---|---|
| 0.001 | 3.33586 |
| 0.0005 | 4.54746 |
| 0.0001 | 7.11551 |