MotifBHE23.H12INVIVO.0.SM.D
Gene (human)BHLHE23
(GeneCards)
Gene synonyms (human)BHLHB4
Gene (mouse)Bhlhe23
Gene synonyms (mouse)Bhlhb4, H20
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
D
Motif length11
ConsensusdvCATATGKYn
GC content43.63%
Information content (bits; total / per base)12.105 / 1.1
Data sourcesHT-SELEX + Methyl-HT-SELEX
Aligned words1752

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Overall, 4 experiments median 0.72 0.714 0.62 0.622 0.571 0.576
best 0.97 0.968 0.776 0.792 0.652 0.679
Methyl HT-SELEX, 1 experiments median 0.97 0.968 0.776 0.792 0.652 0.679
best 0.97 0.968 0.776 0.792 0.652 0.679
Non-Methyl HT-SELEX, 3 experiments median 0.66 0.658 0.584 0.587 0.546 0.553
best 0.78 0.769 0.656 0.656 0.596 0.599
TF superclassBasic domains {1} (TFClass)
TF classBasic helix-loop-helix factors (bHLH) {1.2} (TFClass)
TF familyTal-related {1.2.3} (TFClass)
TF subfamilyNeurogenin-ATO {1.2.3.4} (TFClass)
TFClass IDTFClass: 1.2.3.4.12
HGNCHGNC:16093
MGIMGI:2153710
EntrezGene (human)GeneID:128408
(SSTAR profile)
EntrezGene (mouse)GeneID:140489
(SSTAR profile)
UniProt ID (human)BHE23_HUMAN
UniProt ID (mouse)BHE23_MOUSE
UniProt AC (human)Q8NDY6
(TFClass)
UniProt AC (mouse)Q8BGW3
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 0 mouse
HT-SELEX 3
Methyl-HT-SELEX 1
PCM
ACGT
01522.25210.25766.25253.25
02528.25407.25710.25106.25
03130.01555.040.027.0
041614.00.0136.02.0
050.00.00.01752.0
061752.00.00.00.0
071.0152.00.01599.0
080.00.01752.00.0
0942.0269.0957.0484.0
1066.75256.75211.751216.75
11285.75414.75570.75480.75
PFM
ACGT
010.2980.120.4370.145
020.3020.2320.4050.061
030.0740.8880.0230.015
040.9210.00.0780.001
050.00.00.01.0
061.00.00.00.0
070.0010.0870.00.913
080.00.01.00.0
090.0240.1540.5460.276
100.0380.1470.1210.694
110.1630.2370.3260.274
PWM
ACGT
010.175-0.7290.557-0.545
020.187-0.0720.482-1.403
03-1.2051.264-2.352-2.724
041.301-5.462-1.16-4.734
05-5.462-5.462-5.4621.383
061.383-5.462-5.462-5.462
07-5.033-1.05-5.4621.292
08-5.462-5.4621.383-5.462
09-2.305-0.4850.7790.099
10-1.858-0.531-0.7221.019
11-0.425-0.0540.2640.093
Standard thresholds
P-value Threshold
0.001 3.756715
0.0005 5.107615
0.0001 7.51289