| Motif | BHE23.H12INVITRO.0.SM.B |
| Gene (human) | BHLHE23 (GeneCards) |
| Gene synonyms (human) | BHLHB4 |
| Gene (mouse) | Bhlhe23 |
| Gene synonyms (mouse) | Bhlhb4, H20 |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | B |
| Motif | BHE23.H12INVITRO.0.SM.B |
| Gene (human) | BHLHE23 (GeneCards) |
| Gene synonyms (human) | BHLHB4 |
| Gene (mouse) | Bhlhe23 |
| Gene synonyms (mouse) | Bhlhb4, H20 |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | B |
| Motif length | 11 |
| Consensus | dvCATATGKYn |
| GC content | 43.63% |
| Information content (bits; total / per base) | 12.105 / 1.1 |
| Data sources | HT-SELEX + Methyl-HT-SELEX |
| Aligned words | 1752 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Overall, 4 experiments | median | 0.72 | 0.714 | 0.62 | 0.622 | 0.571 | 0.576 |
| best | 0.97 | 0.968 | 0.776 | 0.792 | 0.652 | 0.679 | |
| Methyl HT-SELEX, 1 experiments | median | 0.97 | 0.968 | 0.776 | 0.792 | 0.652 | 0.679 |
| best | 0.97 | 0.968 | 0.776 | 0.792 | 0.652 | 0.679 | |
| Non-Methyl HT-SELEX, 3 experiments | median | 0.66 | 0.658 | 0.584 | 0.587 | 0.546 | 0.553 |
| best | 0.78 | 0.769 | 0.656 | 0.656 | 0.596 | 0.599 | |
| TF superclass | Basic domains {1} (TFClass) |
| TF class | Basic helix-loop-helix factors (bHLH) {1.2} (TFClass) |
| TF family | Tal-related {1.2.3} (TFClass) |
| TF subfamily | Neurogenin-ATO {1.2.3.4} (TFClass) |
| TFClass ID | TFClass: 1.2.3.4.12 |
| HGNC | HGNC:16093 |
| MGI | MGI:2153710 |
| EntrezGene (human) | GeneID:128408 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:140489 (SSTAR profile) |
| UniProt ID (human) | BHE23_HUMAN |
| UniProt ID (mouse) | BHE23_MOUSE |
| UniProt AC (human) | Q8NDY6 (TFClass) |
| UniProt AC (mouse) | Q8BGW3 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 0 human, 0 mouse |
| HT-SELEX | 3 |
| Methyl-HT-SELEX | 1 |
| PCM | BHE23.H12INVITRO.0.SM.B.pcm |
| PWM | BHE23.H12INVITRO.0.SM.B.pwm |
| PFM | BHE23.H12INVITRO.0.SM.B.pfm |
| Alignment | BHE23.H12INVITRO.0.SM.B.words.tsv |
| Threshold to P-value map | BHE23.H12INVITRO.0.SM.B.thr |
| Motif in other formats | |
| JASPAR format | BHE23.H12INVITRO.0.SM.B_jaspar_format.txt |
| MEME format | BHE23.H12INVITRO.0.SM.B_meme_format.meme |
| Transfac format | BHE23.H12INVITRO.0.SM.B_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 522.25 | 210.25 | 766.25 | 253.25 |
| 02 | 528.25 | 407.25 | 710.25 | 106.25 |
| 03 | 130.0 | 1555.0 | 40.0 | 27.0 |
| 04 | 1614.0 | 0.0 | 136.0 | 2.0 |
| 05 | 0.0 | 0.0 | 0.0 | 1752.0 |
| 06 | 1752.0 | 0.0 | 0.0 | 0.0 |
| 07 | 1.0 | 152.0 | 0.0 | 1599.0 |
| 08 | 0.0 | 0.0 | 1752.0 | 0.0 |
| 09 | 42.0 | 269.0 | 957.0 | 484.0 |
| 10 | 66.75 | 256.75 | 211.75 | 1216.75 |
| 11 | 285.75 | 414.75 | 570.75 | 480.75 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.298 | 0.12 | 0.437 | 0.145 |
| 02 | 0.302 | 0.232 | 0.405 | 0.061 |
| 03 | 0.074 | 0.888 | 0.023 | 0.015 |
| 04 | 0.921 | 0.0 | 0.078 | 0.001 |
| 05 | 0.0 | 0.0 | 0.0 | 1.0 |
| 06 | 1.0 | 0.0 | 0.0 | 0.0 |
| 07 | 0.001 | 0.087 | 0.0 | 0.913 |
| 08 | 0.0 | 0.0 | 1.0 | 0.0 |
| 09 | 0.024 | 0.154 | 0.546 | 0.276 |
| 10 | 0.038 | 0.147 | 0.121 | 0.694 |
| 11 | 0.163 | 0.237 | 0.326 | 0.274 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.175 | -0.729 | 0.557 | -0.545 |
| 02 | 0.187 | -0.072 | 0.482 | -1.403 |
| 03 | -1.205 | 1.264 | -2.352 | -2.724 |
| 04 | 1.301 | -5.462 | -1.16 | -4.734 |
| 05 | -5.462 | -5.462 | -5.462 | 1.383 |
| 06 | 1.383 | -5.462 | -5.462 | -5.462 |
| 07 | -5.033 | -1.05 | -5.462 | 1.292 |
| 08 | -5.462 | -5.462 | 1.383 | -5.462 |
| 09 | -2.305 | -0.485 | 0.779 | 0.099 |
| 10 | -1.858 | -0.531 | -0.722 | 1.019 |
| 11 | -0.425 | -0.054 | 0.264 | 0.093 |
| P-value | Threshold |
|---|---|
| 0.001 | 3.756715 |
| 0.0005 | 5.107615 |
| 0.0001 | 7.51289 |