| Motif | BHE22.H12CORE.0.SM.B |
| Gene (human) | BHLHE22 (GeneCards) |
| Gene synonyms (human) | BHLHB5, TNRC20 |
| Gene (mouse) | Bhlhe22 |
| Gene synonyms (mouse) | Bhlhb5 |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | B |
| Motif | BHE22.H12CORE.0.SM.B |
| Gene (human) | BHLHE22 (GeneCards) |
| Gene synonyms (human) | BHLHB5, TNRC20 |
| Gene (mouse) | Bhlhe22 |
| Gene synonyms (mouse) | Bhlhb5 |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | B |
| Motif length | 11 |
| Consensus | nvCATATGKYn |
| GC content | 41.68% |
| Information content (bits; total / per base) | 12.312 / 1.119 |
| Data sources | HT-SELEX + Methyl-HT-SELEX |
| Aligned words | 9849 |
| HT-SELEX benchmarking | auROC10 | auPRC10 | auROC25 | auPRC25 | auROC50 | auPRC50 | |
|---|---|---|---|---|---|---|---|
| Overall, 4 experiments | median | 0.995 | 0.991 | 0.955 | 0.951 | 0.803 | 0.817 |
| best | 0.999 | 0.999 | 0.995 | 0.993 | 0.945 | 0.943 | |
| Methyl HT-SELEX, 1 experiments | median | 0.991 | 0.987 | 0.935 | 0.925 | 0.816 | 0.814 |
| best | 0.991 | 0.987 | 0.935 | 0.925 | 0.816 | 0.814 | |
| Non-Methyl HT-SELEX, 3 experiments | median | 0.998 | 0.996 | 0.976 | 0.976 | 0.789 | 0.82 |
| best | 0.999 | 0.999 | 0.995 | 0.993 | 0.945 | 0.943 | |
| TF superclass | Basic domains {1} (TFClass) |
| TF class | Basic helix-loop-helix factors (bHLH) {1.2} (TFClass) |
| TF family | Tal-related {1.2.3} (TFClass) |
| TF subfamily | Neurogenin-ATO {1.2.3.4} (TFClass) |
| TFClass ID | TFClass: 1.2.3.4.11 |
| HGNC | HGNC:11963 |
| MGI | MGI:1930001 |
| EntrezGene (human) | GeneID:27319 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:59058 (SSTAR profile) |
| UniProt ID (human) | BHE22_HUMAN |
| UniProt ID (mouse) | BHE22_MOUSE |
| UniProt AC (human) | Q8NFJ8 (TFClass) |
| UniProt AC (mouse) | Q8C6A8 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 0 human, 0 mouse |
| HT-SELEX | 3 |
| Methyl-HT-SELEX | 1 |
| PCM | BHE22.H12CORE.0.SM.B.pcm |
| PWM | BHE22.H12CORE.0.SM.B.pwm |
| PFM | BHE22.H12CORE.0.SM.B.pfm |
| Alignment | BHE22.H12CORE.0.SM.B.words.tsv |
| Threshold to P-value map | BHE22.H12CORE.0.SM.B.thr |
| Motif in other formats | |
| JASPAR format | BHE22.H12CORE.0.SM.B_jaspar_format.txt |
| MEME format | BHE22.H12CORE.0.SM.B_meme_format.meme |
| Transfac format | BHE22.H12CORE.0.SM.B_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 2854.0 | 1618.0 | 3557.0 | 1820.0 |
| 02 | 1774.25 | 4749.25 | 2500.25 | 825.25 |
| 03 | 464.0 | 9062.0 | 248.0 | 75.0 |
| 04 | 8884.0 | 20.0 | 500.0 | 445.0 |
| 05 | 0.0 | 48.0 | 73.0 | 9728.0 |
| 06 | 9811.0 | 17.0 | 21.0 | 0.0 |
| 07 | 112.0 | 11.0 | 11.0 | 9715.0 |
| 08 | 0.0 | 0.0 | 9847.0 | 2.0 |
| 09 | 16.0 | 1322.0 | 4743.0 | 3768.0 |
| 10 | 619.5 | 1257.5 | 729.5 | 7242.5 |
| 11 | 2124.5 | 2158.5 | 2664.5 | 2901.5 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.29 | 0.164 | 0.361 | 0.185 |
| 02 | 0.18 | 0.482 | 0.254 | 0.084 |
| 03 | 0.047 | 0.92 | 0.025 | 0.008 |
| 04 | 0.902 | 0.002 | 0.051 | 0.045 |
| 05 | 0.0 | 0.005 | 0.007 | 0.988 |
| 06 | 0.996 | 0.002 | 0.002 | 0.0 |
| 07 | 0.011 | 0.001 | 0.001 | 0.986 |
| 08 | 0.0 | 0.0 | 1.0 | 0.0 |
| 09 | 0.002 | 0.134 | 0.482 | 0.383 |
| 10 | 0.063 | 0.128 | 0.074 | 0.735 |
| 11 | 0.216 | 0.219 | 0.271 | 0.295 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.148 | -0.419 | 0.368 | -0.302 |
| 02 | -0.327 | 0.656 | 0.015 | -1.091 |
| 03 | -1.665 | 1.302 | -2.287 | -3.462 |
| 04 | 1.283 | -4.705 | -1.591 | -1.707 |
| 05 | -6.977 | -3.892 | -3.488 | 1.373 |
| 06 | 1.382 | -4.85 | -4.661 | -6.977 |
| 07 | -3.071 | -5.222 | -5.222 | 1.372 |
| 08 | -6.977 | -6.977 | 1.385 | -6.351 |
| 09 | -4.903 | -0.621 | 0.655 | 0.425 |
| 10 | -1.377 | -0.671 | -1.214 | 1.078 |
| 11 | -0.147 | -0.132 | 0.079 | 0.164 |
| P-value | Threshold |
|---|---|
| 0.001 | 3.532235 |
| 0.0005 | 4.7821 |
| 0.0001 | 7.39962 |