MotifBATF.H12RSNP.1.P.D
Gene (human)BATF
(GeneCards)
Gene synonyms (human)
Gene (mouse)Batf
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype1
Quality
D
Motif length11
ConsensusdvTGACTCAdh
GC content39.28%
Information content (bits; total / per base)11.62 / 1.056
Data sourcesChIP-Seq
Aligned words1000

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 4 (26) 0.777 0.881 0.708 0.821 0.735 0.85 2.561 3.119 210.058 292.824
Mouse 31 (192) 0.837 0.897 0.751 0.826 0.809 0.874 2.811 3.291 159.758 286.824
TF superclassBasic domains {1} (TFClass)
TF classBasic leucine zipper factors (bZIP) {1.1} (TFClass)
TF familyB-ATF-related {1.1.4} (TFClass)
TF subfamily {1.1.4.0} (TFClass)
TFClass IDTFClass: 1.1.4.0.1
HGNCHGNC:958
MGIMGI:1859147
EntrezGene (human)GeneID:10538
(SSTAR profile)
EntrezGene (mouse)GeneID:53314
(SSTAR profile)
UniProt ID (human)BATF_HUMAN
UniProt ID (mouse)BATF_MOUSE
UniProt AC (human)Q16520
(TFClass)
UniProt AC (mouse)O35284
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 4 human, 31 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01273.095.0224.0408.0
02435.0242.0191.0132.0
0310.08.07.0975.0
041.011.0894.094.0
05980.09.04.07.0
0647.0953.00.00.0
0742.06.04.0948.0
0880.0827.085.08.0
09914.011.012.063.0
10198.0140.0304.0358.0
11418.0201.093.0288.0
PFM
ACGT
010.2730.0950.2240.408
020.4350.2420.1910.132
030.010.0080.0070.975
040.0010.0110.8940.094
050.980.0090.0040.007
060.0470.9530.00.0
070.0420.0060.0040.948
080.080.8270.0850.008
090.9140.0110.0120.063
100.1980.140.3040.358
110.4180.2010.0930.288
PWM
ACGT
010.087-0.956-0.1090.487
020.551-0.032-0.267-0.633
03-3.066-3.253-3.3621.356
04-4.525-2.9851.269-0.967
051.361-3.156-3.783-3.362
06-1.6421.333-4.982-4.982
07-1.75-3.484-3.7831.328
08-1.1251.192-1.066-3.253
091.291-2.985-2.909-1.358
10-0.231-0.5740.1940.357
110.511-0.216-0.9770.141
Standard thresholds
P-value Threshold
0.001 4.20712
0.0005 5.19919
0.0001 7.328915