| Motif | BATF.H12INVITRO.1.P.D |
| Gene (human) | BATF (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Batf |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 1 |
| Quality | D |
| Motif | BATF.H12INVITRO.1.P.D |
| Gene (human) | BATF (GeneCards) |
| Gene synonyms (human) | |
| Gene (mouse) | Batf |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 1 |
| Quality | D |
| Motif length | 11 |
| Consensus | dvTGACTCAdh |
| GC content | 39.28% |
| Information content (bits; total / per base) | 11.62 / 1.056 |
| Data sources | ChIP-Seq |
| Aligned words | 1000 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Human | 4 (26) | 0.777 | 0.881 | 0.708 | 0.821 | 0.735 | 0.85 | 2.561 | 3.119 | 210.058 | 292.824 |
| Mouse | 31 (192) | 0.837 | 0.897 | 0.751 | 0.826 | 0.809 | 0.874 | 2.811 | 3.291 | 159.758 | 286.824 |
| TF superclass | Basic domains {1} (TFClass) |
| TF class | Basic leucine zipper factors (bZIP) {1.1} (TFClass) |
| TF family | B-ATF-related {1.1.4} (TFClass) |
| TF subfamily | {1.1.4.0} (TFClass) |
| TFClass ID | TFClass: 1.1.4.0.1 |
| HGNC | HGNC:958 |
| MGI | MGI:1859147 |
| EntrezGene (human) | GeneID:10538 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:53314 (SSTAR profile) |
| UniProt ID (human) | BATF_HUMAN |
| UniProt ID (mouse) | BATF_MOUSE |
| UniProt AC (human) | Q16520 (TFClass) |
| UniProt AC (mouse) | O35284 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 4 human, 31 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | BATF.H12INVITRO.1.P.D.pcm |
| PWM | BATF.H12INVITRO.1.P.D.pwm |
| PFM | BATF.H12INVITRO.1.P.D.pfm |
| Alignment | BATF.H12INVITRO.1.P.D.words.tsv |
| Threshold to P-value map | BATF.H12INVITRO.1.P.D.thr |
| Motif in other formats | |
| JASPAR format | BATF.H12INVITRO.1.P.D_jaspar_format.txt |
| MEME format | BATF.H12INVITRO.1.P.D_meme_format.meme |
| Transfac format | BATF.H12INVITRO.1.P.D_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 273.0 | 95.0 | 224.0 | 408.0 |
| 02 | 435.0 | 242.0 | 191.0 | 132.0 |
| 03 | 10.0 | 8.0 | 7.0 | 975.0 |
| 04 | 1.0 | 11.0 | 894.0 | 94.0 |
| 05 | 980.0 | 9.0 | 4.0 | 7.0 |
| 06 | 47.0 | 953.0 | 0.0 | 0.0 |
| 07 | 42.0 | 6.0 | 4.0 | 948.0 |
| 08 | 80.0 | 827.0 | 85.0 | 8.0 |
| 09 | 914.0 | 11.0 | 12.0 | 63.0 |
| 10 | 198.0 | 140.0 | 304.0 | 358.0 |
| 11 | 418.0 | 201.0 | 93.0 | 288.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.273 | 0.095 | 0.224 | 0.408 |
| 02 | 0.435 | 0.242 | 0.191 | 0.132 |
| 03 | 0.01 | 0.008 | 0.007 | 0.975 |
| 04 | 0.001 | 0.011 | 0.894 | 0.094 |
| 05 | 0.98 | 0.009 | 0.004 | 0.007 |
| 06 | 0.047 | 0.953 | 0.0 | 0.0 |
| 07 | 0.042 | 0.006 | 0.004 | 0.948 |
| 08 | 0.08 | 0.827 | 0.085 | 0.008 |
| 09 | 0.914 | 0.011 | 0.012 | 0.063 |
| 10 | 0.198 | 0.14 | 0.304 | 0.358 |
| 11 | 0.418 | 0.201 | 0.093 | 0.288 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.087 | -0.956 | -0.109 | 0.487 |
| 02 | 0.551 | -0.032 | -0.267 | -0.633 |
| 03 | -3.066 | -3.253 | -3.362 | 1.356 |
| 04 | -4.525 | -2.985 | 1.269 | -0.967 |
| 05 | 1.361 | -3.156 | -3.783 | -3.362 |
| 06 | -1.642 | 1.333 | -4.982 | -4.982 |
| 07 | -1.75 | -3.484 | -3.783 | 1.328 |
| 08 | -1.125 | 1.192 | -1.066 | -3.253 |
| 09 | 1.291 | -2.985 | -2.909 | -1.358 |
| 10 | -0.231 | -0.574 | 0.194 | 0.357 |
| 11 | 0.511 | -0.216 | -0.977 | 0.141 |
| P-value | Threshold |
|---|---|
| 0.001 | 4.20712 |
| 0.0005 | 5.19919 |
| 0.0001 | 7.328915 |