MotifBACH1.H12INVIVO.0.P.B
Gene (human)BACH1
(GeneCards)
Gene synonyms (human)
Gene (mouse)Bach1
Gene synonyms (mouse)
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length12
ConsensusWGCTGAGTCAYn
GC content48.84%
Information content (bits; total / per base)16.131 / 1.344
Data sourcesChIP-Seq
Aligned words1000

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 4 (27) 0.933 0.984 0.912 0.972 0.927 0.982 5.665 6.403 401.328 553.699
Mouse 3 (16) 0.84 0.936 0.832 0.929 0.843 0.935 5.082 6.119 225.561 357.481

rSNP benchmarking, ADASTRA odds-ratio -log-Fisher's P Pearson r Kendall tau
# 1.921 0.987 0.143 0.019
TF superclassBasic domains {1} (TFClass)
TF classBasic leucine zipper factors (bZIP) {1.1} (TFClass)
TF familyJun-related {1.1.1} (TFClass)
TF subfamilyNFE2 {1.1.1.2} (TFClass)
TFClass IDTFClass: 1.1.1.2.5
HGNCHGNC:935
MGIMGI:894680
EntrezGene (human)GeneID:571
(SSTAR profile)
EntrezGene (mouse)GeneID:12013
(SSTAR profile)
UniProt ID (human)BACH1_HUMAN
UniProt ID (mouse)BACH1_MOUSE
UniProt AC (human)O14867
(TFClass)
UniProt AC (mouse)P97302
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 4 human, 3 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0196.055.046.0803.0
029.044.0936.011.0
0340.0940.00.020.0
0436.028.00.0936.0
0522.018.0899.061.0
06922.07.05.066.0
0721.0162.0792.025.0
083.01.00.0996.0
0924.0972.02.02.0
10993.03.04.00.0
1122.0278.090.0610.0
12171.0217.0362.0250.0
PFM
ACGT
010.0960.0550.0460.803
020.0090.0440.9360.011
030.040.940.00.02
040.0360.0280.00.936
050.0220.0180.8990.061
060.9220.0070.0050.066
070.0210.1620.7920.025
080.0030.0010.00.996
090.0240.9720.0020.002
100.9930.0030.0040.0
110.0220.2780.090.61
120.1710.2170.3620.25
PWM
ACGT
01-0.946-1.49-1.6631.162
02-3.156-1.7061.315-2.985
03-1.7971.319-4.982-2.45
04-1.898-2.136-4.9821.315
05-2.362-2.5461.275-1.39
061.3-3.362-3.622-1.313
07-2.405-0.431.148-2.243
08-3.975-4.525-4.9821.377
09-2.2811.353-4.213-4.213
101.374-3.975-3.783-4.982
11-2.3620.105-1.010.888
12-0.377-0.1410.3680.0
Standard thresholds
P-value Threshold
0.001 2.090065
0.0005 3.423995
0.0001 6.15898