MotifATOH8.H12INVIVO.0.P.C
Gene (human)ATOH8
(GeneCards)
Gene synonyms (human)ATH6, BHLHA21
Gene (mouse)Atoh8
Gene synonyms (mouse)Ath6
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length11
ConsensusdvRRCAGMTGb
GC content59.37%
Information content (bits; total / per base)10.773 / 0.979
Data sourcesChIP-Seq
Aligned words1005

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (4) 0.842 0.855 0.755 0.762 0.796 0.819 2.521 2.633 97.108 99.658
TF superclassBasic domains {1} (TFClass)
TF classBasic helix-loop-helix factors (bHLH) {1.2} (TFClass)
TF familyTal-related {1.2.3} (TFClass)
TF subfamilyNeurogenin-ATO {1.2.3.4} (TFClass)
TFClass IDTFClass: 1.2.3.4.10
HGNCHGNC:24126
MGIMGI:1918343
EntrezGene (human)GeneID:84913
(SSTAR profile)
EntrezGene (mouse)GeneID:71093
(SSTAR profile)
UniProt ID (human)ATOH8_HUMAN
UniProt ID (mouse)ATOH8_MOUSE
UniProt AC (human)Q96SQ7
(TFClass)
UniProt AC (mouse)Q99NA2
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
01242.0152.0407.0204.0
02425.0152.0401.027.0
03529.0168.0286.022.0
04547.0117.0328.013.0
0510.0982.08.05.0
06982.02.09.012.0
0719.023.0927.036.0
08196.0727.078.04.0
09110.06.05.0884.0
106.027.0937.035.0
1177.0342.0479.0107.0
PFM
ACGT
010.2410.1510.4050.203
020.4230.1510.3990.027
030.5260.1670.2850.022
040.5440.1160.3260.013
050.010.9770.0080.005
060.9770.0020.0090.012
070.0190.0230.9220.036
080.1950.7230.0780.004
090.1090.0060.0050.88
100.0060.0270.9320.035
110.0770.340.4770.106
PWM
ACGT
01-0.037-0.4980.48-0.207
020.523-0.4980.465-2.175
030.741-0.3990.129-2.367
040.774-0.7560.265-2.844
05-3.0711.358-3.258-3.627
061.358-4.217-3.16-2.914
07-2.502-2.3251.301-1.903
08-0.2461.058-1.155-3.788
09-0.817-3.488-3.6271.253
10-3.488-2.1751.311-1.93
11-1.1670.3070.642-0.844
Standard thresholds
P-value Threshold
0.001 4.49617
0.0005 5.434745
0.0001 7.44322