MotifAP2B.H12CORE.0.SM.B
Gene (human)TFAP2B
(GeneCards)
Gene synonyms (human)
Gene (mouse)Tfap2b
Gene synonyms (mouse)Tcfap2b
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
B
Motif length18
ConsensusddnSCCYvRGGSndhdhn
GC content57.72%
Information content (bits; total / per base)10.857 / 0.603
Data sourcesHT-SELEX + Methyl-HT-SELEX
Aligned words9846

HT-SELEX benchmarking auROC10 auPRC10 auROC25 auPRC25 auROC50 auPRC50
Overall, 3 experiments median 0.977 0.959 0.949 0.915 0.928 0.891
best 0.993 0.989 0.965 0.944 0.935 0.91
Methyl HT-SELEX, 1 experiments median 0.977 0.959 0.965 0.944 0.935 0.91
best 0.977 0.959 0.965 0.944 0.935 0.91
Non-Methyl HT-SELEX, 2 experiments median 0.976 0.959 0.893 0.886 0.786 0.797
best 0.993 0.989 0.949 0.915 0.928 0.891
TF superclassBasic domains {1} (TFClass)
TF classBasic helix-span-helix factors (bHSH) {1.3} (TFClass)
TF familyAP-2 {1.3.1} (TFClass)
TF subfamily {1.3.1.0} (TFClass)
TFClass IDTFClass: 1.3.1.0.2
HGNCHGNC:11743
MGIMGI:104672
EntrezGene (human)GeneID:7021
(SSTAR profile)
EntrezGene (mouse)GeneID:21419
(SSTAR profile)
UniProt ID (human)AP2B_HUMAN
UniProt ID (mouse)AP2B_MOUSE
UniProt AC (human)Q92481
(TFClass)
UniProt AC (mouse)Q61313
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 0 human, 0 mouse
HT-SELEX 2
Methyl-HT-SELEX 1
PCM
ACGT
015421.01171.01550.01704.0
023467.251288.251557.253533.25
032868.02462.01759.02757.0
04355.02566.06589.0336.0
05156.09301.0196.0193.0
06145.08812.0193.0696.0
07163.02473.01099.06111.0
081049.03719.04133.0945.0
095720.0767.03308.051.0
10629.019.09175.023.0
1179.049.09661.057.0
12253.04592.04627.0374.0
132008.03206.02688.01944.0
145554.0901.01693.01698.0
152556.01464.01065.04761.0
162846.01085.01774.04141.0
172173.251761.251448.254463.25
182534.01996.02143.03173.0
PFM
ACGT
010.5510.1190.1570.173
020.3520.1310.1580.359
030.2910.250.1790.28
040.0360.2610.6690.034
050.0160.9450.020.02
060.0150.8950.020.071
070.0170.2510.1120.621
080.1070.3780.420.096
090.5810.0780.3360.005
100.0640.0020.9320.002
110.0080.0050.9810.006
120.0260.4660.470.038
130.2040.3260.2730.197
140.5640.0920.1720.172
150.260.1490.1080.484
160.2890.110.180.421
170.2210.1790.1470.453
180.2570.2030.2180.322
PWM
ACGT
010.789-0.742-0.462-0.367
020.342-0.647-0.4570.361
030.1530.0-0.3360.113
04-1.9310.0420.984-1.986
05-2.7451.329-2.52-2.535
06-2.8171.275-2.535-1.261
07-2.7020.005-0.8050.909
08-0.8520.4120.518-0.956
090.843-1.1640.295-3.834
10-1.362-4.7511.315-4.579
11-3.411-3.8721.367-3.727
12-2.2670.6230.631-1.879
13-0.2030.2640.088-0.236
140.813-1.003-0.374-0.371
150.038-0.519-0.8370.659
160.145-0.818-0.3270.52
17-0.124-0.334-0.530.595
180.029-0.209-0.1380.254
Standard thresholds
P-value Threshold
0.001 4.49076
0.0005 5.42611
0.0001 7.31656