MotifAHRR.H12INVIVO.0.P.C
Gene (human)AHRR
(GeneCards)
Gene synonyms (human)BHLHE77, KIAA1234
Gene (mouse)Ahrr
Gene synonyms (mouse)Kiaa1234
LOGO
LOGO (reverse complement)
Motif subtype0
Quality
C
Motif length11
ConsensusbYKCGTGMvWd
GC content57.78%
Information content (bits; total / per base)10.099 / 0.918
Data sourcesChIP-Seq
Aligned words1002

ChIP-Seq benchmarking Num. of experiments (peaksets) auROC, median auROC, best auPRC, median auPRC, best pseudo-auROC, median pseudo-auROC, best pseudo-log-auROC, median pseudo-log-auROC, best Centrality, median Centrality, best
Human 1 (5) 0.887 0.909 0.824 0.85 0.828 0.86 2.96 3.136 237.056 295.481
TF superclassBasic domains {1} (TFClass)
TF classBasic helix-loop-helix factors (bHLH) {1.2} (TFClass)
TF familyPAS {1.2.5} (TFClass)
TF subfamilyPAS-AHR {1.2.5.1} (TFClass)
TFClass IDTFClass: 1.2.5.1.2
HGNCHGNC:346
MGIMGI:1333776
EntrezGene (human)GeneID:57491
(SSTAR profile)
EntrezGene (mouse)GeneID:11624
(SSTAR profile)
UniProt ID (human)AHRR_HUMAN
UniProt ID (mouse)AHRR_MOUSE
UniProt AC (human)A9YTQ3
(TFClass)
UniProt AC (mouse)Q3U1U7
(TFClass)
GRECO-DB-TF
yes
ChIP-Seq 1 human, 0 mouse
HT-SELEX 0
Methyl-HT-SELEX 0
PCM
ACGT
0173.0142.0271.0516.0
02117.0132.071.0682.0
0330.097.0748.0127.0
0415.0950.05.032.0
0588.013.0896.05.0
064.01.00.0997.0
070.00.0963.039.0
08245.0622.05.0130.0
09166.0425.0323.088.0
10648.036.0122.0196.0
11292.0159.0388.0163.0
PFM
ACGT
010.0730.1420.270.515
020.1170.1320.0710.681
030.030.0970.7470.127
040.0150.9480.0050.032
050.0880.0130.8940.005
060.0040.0010.00.995
070.00.00.9610.039
080.2450.6210.0050.13
090.1660.4240.3220.088
100.6470.0360.1220.196
110.2910.1590.3870.163
PWM
ACGT
01-1.216-0.5620.0780.719
02-0.754-0.635-1.2440.997
03-2.073-0.9381.089-0.673
04-2.7131.328-3.624-2.012
05-1.034-2.8411.27-3.624
06-3.785-4.527-4.9841.376
07-4.984-4.9841.342-1.823
08-0.0220.905-3.624-0.65
09-0.4080.5260.253-1.034
100.946-1.9-0.712-0.243
110.152-0.4510.435-0.426
Standard thresholds
P-value Threshold
0.001 4.802915
0.0005 5.684825
0.0001 7.37524