| Motif | AHR.H12INVIVO.0.P.B |
| Gene (human) | AHR (GeneCards) |
| Gene synonyms (human) | BHLHE76 |
| Gene (mouse) | Ahr |
| Gene synonyms (mouse) | |
| LOGO |  |
| LOGO (reverse complement) |  |
| Motif subtype | 0 |
| Quality | B |
| Motif | AHR.H12INVIVO.0.P.B |
| Gene (human) | AHR (GeneCards) |
| Gene synonyms (human) | BHLHE76 |
| Gene (mouse) | Ahr |
| Gene synonyms (mouse) | |
| LOGO | |
| LOGO (reverse complement) | |
| Motif subtype | 0 |
| Quality | B |
| Motif length | 8 |
| Consensus | bWGCGTGM |
| GC content | 64.82% |
| Information content (bits; total / per base) | 10.452 / 1.306 |
| Data sources | ChIP-Seq |
| Aligned words | 1001 |
| ChIP-Seq benchmarking | Num. of experiments (peaksets) | auROC, median | auROC, best | auPRC, median | auPRC, best | pseudo-auROC, median | pseudo-auROC, best | pseudo-log-auROC, median | pseudo-log-auROC, best | Centrality, median | Centrality, best |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Mouse | 11 (74) | 0.918 | 0.947 | 0.838 | 0.888 | 0.862 | 0.909 | 2.819 | 3.19 | 215.62 | 475.319 |
| rSNP benchmarking, ADASTRA | odds-ratio | -log-Fisher's P | Pearson r | Kendall tau |
|---|---|---|---|---|
| # | 3.818 | 3.596 | 0.208 | 0.095 |
| TF superclass | Basic domains {1} (TFClass) |
| TF class | Basic helix-loop-helix factors (bHLH) {1.2} (TFClass) |
| TF family | PAS {1.2.5} (TFClass) |
| TF subfamily | PAS-AHR {1.2.5.1} (TFClass) |
| TFClass ID | TFClass: 1.2.5.1.1 |
| HGNC | HGNC:348 |
| MGI | MGI:105043 |
| EntrezGene (human) | GeneID:196 (SSTAR profile) |
| EntrezGene (mouse) | GeneID:11622 (SSTAR profile) |
| UniProt ID (human) | AHR_HUMAN |
| UniProt ID (mouse) | AHR_MOUSE |
| UniProt AC (human) | P35869 (TFClass) |
| UniProt AC (mouse) | P30561 (TFClass) |
| GRECO-DB-TF | yes |
| ChIP-Seq | 0 human, 11 mouse |
| HT-SELEX | 0 |
| Methyl-HT-SELEX | 0 |
| PCM | AHR.H12INVIVO.0.P.B.pcm |
| PWM | AHR.H12INVIVO.0.P.B.pwm |
| PFM | AHR.H12INVIVO.0.P.B.pfm |
| Alignment | AHR.H12INVIVO.0.P.B.words.tsv |
| Threshold to P-value map | AHR.H12INVIVO.0.P.B.thr |
| Motif in other formats | |
| JASPAR format | AHR.H12INVIVO.0.P.B_jaspar_format.txt |
| MEME format | AHR.H12INVIVO.0.P.B_meme_format.meme |
| Transfac format | AHR.H12INVIVO.0.P.B_transfac_format.txt |
| Homer format | |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 101.0 | 119.0 | 384.0 | 397.0 |
| 02 | 125.0 | 57.0 | 90.0 | 729.0 |
| 03 | 13.0 | 69.0 | 828.0 | 91.0 |
| 04 | 5.0 | 991.0 | 0.0 | 5.0 |
| 05 | 23.0 | 2.0 | 972.0 | 4.0 |
| 06 | 1.0 | 0.0 | 0.0 | 1000.0 |
| 07 | 3.0 | 0.0 | 997.0 | 1.0 |
| 08 | 181.0 | 673.0 | 9.0 | 138.0 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.101 | 0.119 | 0.384 | 0.397 |
| 02 | 0.125 | 0.057 | 0.09 | 0.728 |
| 03 | 0.013 | 0.069 | 0.827 | 0.091 |
| 04 | 0.005 | 0.99 | 0.0 | 0.005 |
| 05 | 0.023 | 0.002 | 0.971 | 0.004 |
| 06 | 0.001 | 0.0 | 0.0 | 0.999 |
| 07 | 0.003 | 0.0 | 0.996 | 0.001 |
| 08 | 0.181 | 0.672 | 0.009 | 0.138 |
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.897 | -0.736 | 0.426 | 0.459 |
| 02 | -0.687 | -1.456 | -1.011 | 1.065 |
| 03 | -2.84 | -1.271 | 1.192 | -1.0 |
| 04 | -3.623 | 1.371 | -4.983 | -3.623 |
| 05 | -2.321 | -4.214 | 1.352 | -3.784 |
| 06 | -4.526 | -4.983 | -4.983 | 1.38 |
| 07 | -3.976 | -4.983 | 1.377 | -4.526 |
| 08 | -0.321 | 0.985 | -3.157 | -0.59 |
| P-value | Threshold |
|---|---|
| 0.001 | 4.72403 |
| 0.0005 | 5.720545 |
| 0.0001 | 7.60238 |